RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ATAD3AQ9NVI7 634 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 AIPL1Q9NZN9 384 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 KIAA1024Q9UPX6 916 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 TRIM17Q9Y577 477 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 TRIM43BA6NCK2 446 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 IMPDH2P12268 514 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 CAP2P40123 477 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 KLHL30Q0D2K2 578 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 TCP10Q12799 353 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 DHX34Q14147 1143 aaKnown RBP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 SPIDRQ14159 915 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 EAPPQ56P03 285 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 ZNF554Q86TJ5 538 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 KIAA0895Q8NCT3 520 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 TMEM174Q8WUU8 243 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 DNAJC19Q96DA6 116 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 LRRC1Q9BTT6 524 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 TDRD3Q9H7E2 651 aaKnown RBP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 B4DLN1 442 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 H0YCG3 227 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 ZNF185O15231 689 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 HAUS5O94927 633 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 ATP1A1P05023 1023 aaKnown RBP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 SKIV2L2P42285 1042 aaKnown RBP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 KRT72Q14CN4 511 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 C16orf72Q14CZ0 275 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 KAZNQ674X7 775 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 FAM9CQ8IZT9 166 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 SLC26A7Q8TE54 656 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 RBM41Q96IZ5 413 aaKnown RBP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 KIAA1683Q9H0B3 1180 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 EPS8L2Q9H6S3 715 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 TBC1D22BQ9NU19 505 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 DCTN4Q9UJW0 460 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 STRIP2Q9ULQ0 834 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 CARD8Q9Y2G2 431 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 TMED5Q9Y3A6 229 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 PCDHB13Q9Y5F0 798 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 CFAP69A5D8W1 941 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 POTEMA6NI47 508 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 STAM2O75886 525 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 SNAPC5O75971 98 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 ICAM1P05362 532 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 HOXB6P17509 224 aaKnown RBP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 FNTAP49354 379 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 FXR1P51114 621 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 EPHB1P54762 984 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 ZNF280AP59817 542 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 RASSF5Q8WWW0 418 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 PRCCQ92733 491 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-214ENST00000540109 KAT2BQ92831 832 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 HPS3Q969F9 1004 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 KIFC2Q96AC6 838 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 ZIM3Q96PE6 472 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 EMILIN3Q9NT22 766 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 DNAJC12Q9UKB3 198 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 SH3GLB1Q9Y371 365 aa6.38□□□□□ -1.39
PTPRD-214ENST00000540109 TTC26A0AVF1 554 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 A6NJR5 290 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 SPDYE16A6NNV3 312 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TCP11X1B4DZS4 312 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TRAF5O00463 557 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 LYPLA2O95372 231 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ETS2P15036 469 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CHN1P15882 459 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 SLC16A2P36021 539 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 RAB27AP51159 221 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 JAK3P52333 1124 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 PLIN5Q00G26 463 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 DCTN2Q13561 401 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 DALRD3Q5D0E6 543 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 HERC4Q5GLZ8 1057 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 RAD9BQ6WBX8 426 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CCNI2Q6ZMN8 369 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 LRRC55Q6ZSA7 311 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 PATL1Q86TB9 770 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 RBM12BQ8IXT5 1001 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 STKLD1Q8NE28 680 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 MAML1Q92585 1016 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TGS1Q96RS0 853 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 RAD21L1Q9H4I0 556 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 L1RE1Q9UN81 338 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 FAM13AO94988 1023 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ALOX5P09917 674 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 SFNP31947 248 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 INPP1P49441 399 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ST13P50502 369 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 DAB2P98082 770 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 LBRQ14739 615 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 MAPRE2Q15555 327 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 THOC7Q6I9Y2 204 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 TRMT10CQ7L0Y3 403 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 MYPNQ86TC9 1320 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 APOBEC3FQ8IUX4 373 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 U2AF1L4Q8WU68 220 aaKnown RBP6.37□□□□□ -1.39
PTPRD-214ENST00000540109 ARL8AQ96BM9 186 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CENPTQ96BT3 561 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 CPVLQ9H3G5 476 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 SLC39A2Q9NP94 309 aa6.37□□□□□ -1.39
PTPRD-214ENST00000540109 UBN1Q9NPG3 1134 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms