RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 ATP11CQ8NB49 1132 aa13.68□□□□□ -0.22
MSH6-210ENST00000540021 TJP1Q07157 1748 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 A0A1W2PPM1 405 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 RNF8O76064 485 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 ZWINTO95229 277 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 TAC1P20366 129 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 ATP4AP20648 1035 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 ALCAMQ13740 583 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 EMC10Q5UCC4 262 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 RGS9BPQ6ZS82 235 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 SYDE1Q6ZW31 735 aaPredicted RBP13.67□□□□□ -0.22
MSH6-210ENST00000540021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.67□□□□□ -0.22
MSH6-210ENST00000540021 IRAK4Q9NWZ3 460 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 GABBR1Q9UBS5 961 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 HEY1Q9Y5J3 304 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 IQANK1A0A1B0GTG1 560 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 MCF2LO15068 1137 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 NCF2P19878 526 aaPredicted RBP13.67□□□□□ -0.22
MSH6-210ENST00000540021 FOXN2P32314 431 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 VHLP40337 213 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 RANBP1P43487 201 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 RIPK1Q13546 671 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 KRT81Q14533 505 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 CC2D2BQ6DHV5 1058 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 FOXR2Q6PJQ5 311 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 MOXD1Q6UVY6 613 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 FAM13CQ8NE31 585 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 DDX50Q9BQ39 737 aaKnown RBP13.67□□□□□ -0.22
MSH6-210ENST00000540021 MANSC1Q9H8J5 431 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 ANGPTL2Q9UKU9 493 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 NUP188Q5SRE5 1749 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 CICQ96RK0 1608 aaPredicted RBP13.67□□□□□ -0.22
MSH6-210ENST00000540021 ATP9AO75110 1047 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 RAD17O75943 681 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 SLC1A1P43005 524 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 CLK2P49760 499 aaKnown RBP13.67□□□□□ -0.22
MSH6-210ENST00000540021 TFDP1Q14186 410 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 KPNB1Q14974 876 aaKnown RBP13.67□□□□□ -0.22
MSH6-210ENST00000540021 CYP4A22Q5TCH4 519 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 SLC26A7Q8TE54 656 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 ACAP3Q96P50 834 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 MSTO1Q9BUK6 570 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 FHDC1Q9C0D6 1143 aaPredicted RBP13.67□□□□□ -0.22
MSH6-210ENST00000540021 DCLRE1BQ9H816 532 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 IFT122Q9HBG6 1241 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 TMEM8AQ9HCN3 771 aa13.67□□□□□ -0.22
MSH6-210ENST00000540021 NKX1-2Q9UD57 310 aaPredicted RBP13.67□□□□□ -0.22
MSH6-210ENST00000540021 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 SERPINB3P29508 390 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 PAPOLAP51003 745 aaKnown RBP13.66□□□□□ -0.22
MSH6-210ENST00000540021 LRRC6Q86X45 466 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 TEX9Q8N6V9 391 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 TCP10LQ8TDR4 215 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 FAF2Q96CS3 445 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 ADAM7Q9H2U9 754 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 NDE1Q9NXR1 346 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 CYP39A1Q9NYL5 469 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 MYH3P11055 1940 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 SPECC1L-ADORA2AF8WAN1 911 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 KRT36O76013 467 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 ADRB2P07550 413 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 MPP2Q14168 576 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 FASTKD3Q14CZ7 662 aaKnown RBP13.66□□□□□ -0.22
MSH6-210ENST00000540021 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.66□□□□□ -0.22
MSH6-210ENST00000540021 MIS18BP1Q6P0N0 1132 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 ARID3BQ8IVW6 561 aaPredicted RBP13.66□□□□□ -0.22
MSH6-210ENST00000540021 CERS5Q8N5B7 392 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 KREMEN1Q96MU8 473 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 RMDN3Q96TC7 470 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 ROBO3Q96MS0 1386 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 DPPA5A6NC42 116 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 C2orf71A6NGG8 1288 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 K7ERI5 159 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 HLA-DRAP01903 254 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 IL1R1P14778 569 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 SAT1P21673 171 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 TM4SF1P30408 202 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 SWSAP1Q6NVH7 229 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 GPD1LQ8N335 351 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 AGR3Q8TD06 166 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 ZNF75CPQ92670 426 aaPredicted RBP13.66□□□□□ -0.22
MSH6-210ENST00000540021 SEMA4DQ92854 862 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 NSL1Q96IY1 281 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 HSD17B14Q9BPX1 270 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 KIAA1586Q9HCI6 787 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
MSH6-210ENST00000540021 ZMYND8Q9ULU4 1186 aaPredicted RBP13.66□□□□□ -0.22
MSH6-210ENST00000540021 FAXCQ5TGI0 409 aa13.65□□□□□ -0.22
MSH6-210ENST00000540021 MCOLN2Q8IZK6 566 aa13.65□□□□□ -0.22
MSH6-210ENST00000540021 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.65□□□□□ -0.22
MSH6-210ENST00000540021 RBBP8NLQ8NC74 664 aaPredicted RBP13.65□□□□□ -0.22
MSH6-210ENST00000540021 RAB3IL1Q8TBN0 382 aa13.65□□□□□ -0.22
MSH6-210ENST00000540021 PIP4K2CQ8TBX8 421 aa13.65□□□□□ -0.22
MSH6-210ENST00000540021 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
MSH6-210ENST00000540021 VCX3BQ9H321 246 aa13.65□□□□□ -0.22
MSH6-210ENST00000540021 LRRC19Q9H756 370 aa13.65□□□□□ -0.22
MSH6-210ENST00000540021 FBXO6Q9NRD1 293 aaPredicted RBP13.65□□□□□ -0.22
MSH6-210ENST00000540021 SENP1Q9P0U3 644 aa13.65□□□□□ -0.22
MSH6-210ENST00000540021 VAV3Q9UKW4 847 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms