RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 CREB3L3Q68CJ9 461 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 ZNF772Q68DY9 489 aaPredicted RBP6.88□□□□□ -1.31
MRE11-209ENST00000540013 ITPRIPL1Q6GPH6 555 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 RFX8Q6ZV50 586 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 STK32CQ86UX6 486 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 CMIPQ8IY22 773 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 PCYOX1LQ8NBM8 494 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 HIPK4Q8NE63 616 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 GBP4Q96PP9 640 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 RMDN3Q96TC7 470 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 TMEM120AQ9BXJ8 343 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 LMAN2LQ9H0V9 348 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 L2HGDHQ9H9P8 463 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 INCENPQ9NQS7 918 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 SPATA6Q9NWH7 488 aaPredicted RBP6.88□□□□□ -1.31
MRE11-209ENST00000540013 OXSMQ9NWU1 459 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 CROTQ9UKG9 612 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 SPO11Q9Y5K1 396 aa6.88□□□□□ -1.31
MRE11-209ENST00000540013 MARF1Q9Y4F3 1742 aaKnown RBP6.87□□□□□ -1.31
MRE11-209ENST00000540013 COL22A1Q8NFW1 1626 aaPredicted RBP6.87□□□□□ -1.31
MRE11-209ENST00000540013 ADGRB2O60241 1585 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 PXDNQ92626 1479 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 EIF3FO00303 357 aaPredicted RBP6.87□□□□□ -1.31
MRE11-209ENST00000540013 ADAMTS3O15072 1205 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 TGM5O43548 720 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 MGEA5O60502 916 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 SASH1O94885 1247 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 GALNSP34059 522 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 KRT20P35900 424 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 UBA7P41226 1012 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 TECP42680 631 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 ARL4CP56559 192 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 PHC1P78364 1004 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 DLX2Q07687 328 aaPredicted RBP6.87□□□□□ -1.31
MRE11-209ENST00000540013 SEC23AQ15436 765 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 TAF12Q16514 161 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 FAM26FQ5R3K3 315 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 PRR31Q5SQ13 230 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 PGBD2Q6P3X8 592 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 CXXC5Q7LFL8 322 aaKnown RBP6.87□□□□□ -1.31
MRE11-209ENST00000540013 FAM124AQ86V42 546 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 SNX32Q86XE0 403 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 ATRIPQ8WXE1 791 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 ASB15Q8WXK1 588 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 LRTOMTQ8WZ04 291 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 LTV1Q96GA3 475 aaPredicted RBP6.87□□□□□ -1.31
MRE11-209ENST00000540013 TMEM41AQ96HV5 264 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 ZSCAN31Q96LW9 406 aaPredicted RBP6.87□□□□□ -1.31
MRE11-209ENST00000540013 ZSWIM3Q96MP5 696 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 PRAM1Q96QH2 718 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 SEZ6LQ9BYH1 1024 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 SLC39A2Q9NP94 309 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 UBN1Q9NPG3 1134 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 STARD7Q9NQZ5 370 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 GALNT8Q9NY28 637 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 H2AFY2Q9P0M6 372 aaPredicted RBP6.87□□□□□ -1.31
MRE11-209ENST00000540013 FTSJ1Q9UET6 329 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 ZFP69BQ9UJL9 534 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 ARHGEF28Q8N1W1 1705 aaKnown RBP6.87□□□□□ -1.31
MRE11-209ENST00000540013 KIAA1210Q9ULL0 1709 aa6.87□□□□□ -1.31
MRE11-209ENST00000540013 AFF2P51816 1311 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 C9orf118A6NHY6 69 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 RHPN2P1A8MT19 583 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 MMEP08473 750 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 ZNF28P17035 718 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 CLNS1AP54105 237 aaKnown RBP6.86□□□□□ -1.31
MRE11-209ENST00000540013 WASHC5Q12768 1159 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 CCNG2Q16589 344 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 CATSPEREQ5SY80 951 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 KIAA1614Q5VZ46 1190 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 TRMT10BQ6PF06 316 aaKnown RBP6.86□□□□□ -1.31
MRE11-209ENST00000540013 NPNTQ6UXI9 565 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 DSTYKQ6XUX3 929 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 NEK10Q6ZWH5 1172 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 USP45Q70EL2 814 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 CENPIQ92674 756 aaPredicted RBP6.86□□□□□ -1.31
MRE11-209ENST00000540013 ZC3H10Q96K80 434 aaKnown RBP6.86□□□□□ -1.31
MRE11-209ENST00000540013 BARD1Q99728 777 aaKnown RBP6.86□□□□□ -1.31
MRE11-209ENST00000540013 BTBD1Q9H0C5 482 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 WASH6PQ9NQA3 447 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 ZNF277Q9NRM2 450 aaPredicted RBP6.86□□□□□ -1.31
MRE11-209ENST00000540013 BTBD7Q9P203 1132 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 POGKQ9P215 609 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 IFT80Q9P2H3 777 aaPredicted RBP6.86□□□□□ -1.31
MRE11-209ENST00000540013 RBPJLQ9UBG7 517 aa6.86□□□□□ -1.31
MRE11-209ENST00000540013 MAGED1Q9Y5V3 778 aaPredicted RBP6.86□□□□□ -1.31
MRE11-209ENST00000540013 CAPN8A6NHC0 703 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 NCK2O43639 380 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 TIPRLO75663 272 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 AGXTP21549 392 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 C5AR1P21730 350 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 HOXC13P31276 330 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 LSP1P33241 339 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 IL13P35225 146 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 KCNC1P48547 511 aa6.85□□□□□ -1.31
MRE11-209ENST00000540013 AGFG1P52594 562 aaKnown RBP6.85□□□□□ -1.31
MRE11-209ENST00000540013 NAP1L1P55209 391 aaKnown RBP6.85□□□□□ -1.31
MRE11-209ENST00000540013 POLD3Q15054 466 aaPredicted RBP6.85□□□□□ -1.31
MRE11-209ENST00000540013 EPHA7Q15375 998 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms