RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TRMT61BQ9BVS5 477 aaKnown RBP16.61■□□□□ 0.25
UBE3B-211ENST00000539843 DSEQ9UL01 958 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 EXOC7Q9UPT5 735 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 DERAQ9Y315 318 aa16.61■□□□□ 0.25
UBE3B-211ENST00000539843 CITO14578 2027 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 FAM170BA6NMN3 283 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 LACTBL1A8MY62 500 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 MAN2B1O00754 1011 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 CD2BP2O95400 341 aaKnown RBP16.6■□□□□ 0.25
UBE3B-211ENST00000539843 SEC24AO95486 1093 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 FGF19O95750 216 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 TYMPP19971 482 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 TMEM132DQ14C87 1099 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 ADALQ6DHV7 355 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 METTL23Q86XA0 190 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 MAP4K3Q8IVH8 894 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 YAF2Q8IY57 180 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 DEPDC1BQ8WUY9 529 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 SMARCD2Q92925 531 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 DDX23Q9BUQ8 820 aaKnown RBP16.6■□□□□ 0.25
UBE3B-211ENST00000539843 CCSER1Q9C0I3 900 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 ASB7Q9H672 318 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 LTB4R2Q9NPC1 389 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 STK17AQ9UEE5 414 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 YIPF1Q9Y548 306 aa16.6■□□□□ 0.25
UBE3B-211ENST00000539843 A0A0B4J269 797 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 KINO60870 393 aaKnown RBP16.59■□□□□ 0.25
UBE3B-211ENST00000539843 DDIT3P35638 169 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 TNFSF9P41273 254 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 GTF2BQ00403 316 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 FOXK2Q01167 660 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 MYBPC2Q14324 1141 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 PPP2R5DQ14738 602 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 POSTNQ15063 836 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 ENOX2Q16206 610 aaKnown RBP16.59■□□□□ 0.25
UBE3B-211ENST00000539843 PRSS36Q5K4E3 855 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 SPATA1Q5VX52 437 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 RNF19BQ6ZMZ0 732 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 ITIH5Q86UX2 942 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 BLOC1S4Q9NUP1 217 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 DLGAP2Q9P1A6 1054 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 FBXO4Q9UKT5 387 aa16.59■□□□□ 0.25
UBE3B-211ENST00000539843 TIMM13Q9Y5L4 95 aaPredicted RBP16.59■□□□□ 0.25
UBE3B-211ENST00000539843 MYH11P35749 1972 aa16.58■□□□□ 0.25
UBE3B-211ENST00000539843 SP9P0CG40 484 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 PSMC3P17980 439 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 AARSP49588 968 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBE3B-211ENST00000539843 POU5F1Q01860 360 aaKnown RBP16.58■□□□□ 0.24
UBE3B-211ENST00000539843 GPR17Q13304 367 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 VEPH1Q14D04 833 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 ZBTB6Q15916 424 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 TAF12Q16514 161 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 ZNF528Q3MIS6 628 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 ARHGAP15Q53QZ3 475 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 FAM78AQ5JUQ0 283 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 RRAGBQ5VZM2 374 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 TANGO2Q6ICL3 276 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 JADE1Q6IE81 842 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 C1orf228Q6PIY5 440 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 THEM5Q8N1Q8 247 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 FAM200AQ8TCP9 573 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 ASB16Q96NS5 453 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 PGLYRP2Q96PD5 576 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 GCNAQ96QF7 691 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 SEL1LQ9UBV2 794 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 CPSF3Q9UKF6 684 aaKnown RBP16.58■□□□□ 0.24
UBE3B-211ENST00000539843 AGO2Q9UKV8 859 aaKnown RBP16.58■□□□□ 0.24
UBE3B-211ENST00000539843 C2CD2Q9Y426 696 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 ASB3Q9Y575 518 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 R4GN57 208 aa16.58■□□□□ 0.24
UBE3B-211ENST00000539843 PTPRZ1P23471 2315 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-211ENST00000539843 TRIP11Q15643 1979 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 TULP1O00294 542 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-211ENST00000539843 DPYSL4O14531 572 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 ZNF263O14978 683 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 SPTLC1O15269 473 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 MEFVO15553 781 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-211ENST00000539843 GAP43P17677 238 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 NMT1P30419 496 aaKnown RBP16.57■□□□□ 0.24
UBE3B-211ENST00000539843 LILRA4P59901 499 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 GRM2Q14416 872 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 SV2BQ7L1I2 683 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 NT5DC4Q86YG4 428 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 ZSCAN18Q8TBC5 510 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-211ENST00000539843 ATRIPQ8WXE1 791 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 POMGNT1Q8WZA1 660 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 SECISBP2LQ93073 1101 aaKnown RBP16.57■□□□□ 0.24
UBE3B-211ENST00000539843 TCEAL4Q96EI5 215 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 SENP8Q96LD8 212 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 ZNF560Q96MR9 790 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 IER2Q9BTL4 223 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 HAPLN2Q9GZV7 340 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 ST6GALNAC4Q9H4F1 302 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 MRPL44Q9H9J2 332 aaKnown RBP16.57■□□□□ 0.24
UBE3B-211ENST00000539843 HEBP1Q9NRV9 189 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 CEP72Q9P209 647 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 HSFX1Q9UBD0 423 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 MYH15Q9Y2K3 1946 aa16.57■□□□□ 0.24
UBE3B-211ENST00000539843 IL18RAPO95256 599 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms