RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 PROCRQ9UNN8 238 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 PRDM15P57071 1507 aaPredicted RBP2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 ATP7AQ04656 1500 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 ARHGAP5Q13017 1502 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 FAM135AQ9P2D6 1515 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 ABCC5O15440 1437 aa2.67□□□□□ -1.98
CBX3P4-201ENST00000538909 DENND4BO75064 1496 aaPredicted RBP2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 MTUS2Q5JR59 1369 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 MYMKA6NI61 221 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 KCNU1A8MYU2 1149 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 PPP6CO00743 305 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 KCNQ2O43526 872 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 LATS1O95835 1130 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 POMCP01189 267 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 CTSSP25774 331 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 CERS1P27544 350 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 CRHR1P34998 444 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 MFAP1P55081 439 aaKnown RBP2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 HYAL1Q12794 435 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 SLC44A4Q53GD3 710 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 ZC3H12BQ5HYM0 836 aaKnown RBP2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 CEP78Q5JTW2 689 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 CKAP2LQ8IYA6 745 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 TRMT2AQ8IZ69 625 aaKnown RBP2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 SLC30A5Q8TAD4 765 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 CASKIN2Q8WXE0 1202 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 LPIN2Q92539 896 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 TMEM125Q96AQ2 219 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 MS4A5Q9H3V2 200 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 SERGEFQ9UGK8 458 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 DAPK1P53355 1430 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 YEATS2Q9ULM3 1422 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 UNC13BO14795 1591 aa2.66□□□□□ -1.98
CBX3P4-201ENST00000538909 LMTK2Q8IWU2 1503 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 PLEKHD1A6NEE1 506 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 UNCXA6NJT0 531 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 CBX4O00257 560 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 RAPGEF3O95398 923 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 ATP2A2P16615 1042 aaKnown RBP2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 SFPQP23246 707 aaKnown RBP eCLIP2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 ADSLP30566 484 aaPredicted RBP2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 MEF2AQ02078 507 aaPredicted RBP2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 LAMB3Q13751 1172 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 TRIM25Q14258 630 aaKnown RBP2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 UBXN2BQ14CS0 331 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 TXNRD1Q16881 649 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 NBPF8Q3BBV2 869 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 GPR158Q5T848 1215 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 PXDC1Q5TGL8 231 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 AFMIDQ63HM1 303 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 Q6ZTC4 211 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 CAMKK1Q8N5S9 505 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 CAMKK2Q96RR4 588 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 PRDM12Q9H4Q4 367 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 FBXO34Q9NWN3 711 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 PRSS50Q9UI38 385 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 PPP2R3BQ9Y5P8 575 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 MROH2AA6NES4 1674 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 ZC3H13Q5T200 1668 aaKnown RBP2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 NCOA1Q15788 1441 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 C9orf84Q5VXU9 1444 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 SCAPERQ9BY12 1400 aa2.65□□□□□ -1.99
CBX3P4-201ENST00000538909 ROCK1Q13464 1354 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ATRNL1Q5VV63 1379 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 CCNB3Q8WWL7 1395 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 STK10O94804 968 aaKnown RBP2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ASLP04424 464 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 HNRNPCP07910 306 aaKnown RBP eCLIP2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 JMJD7P0C870 316 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 CKBP12277 381 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ALOX15P16050 662 aaPredicted RBP2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ATP5JP18859 108 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ARHGAP25P42331 645 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 LRRC32Q14392 662 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 RASA3Q14644 834 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ZNF529Q6P280 563 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ZNF572Q7Z3I7 529 aaPredicted RBP2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 UBE3BQ7Z3V4 1068 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 LYSMD2Q8IV50 215 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 CNGA4Q8IV77 575 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 RBMXL3Q8N7X1 1067 aaKnown RBP2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 MYCBPAPQ8TBZ2 947 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 STON2Q8WXE9 905 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 MARK4Q96L34 752 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 TUBA8Q9NY65 449 aaPredicted RBP2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 PPP1R1BQ9UD71 204 aaPredicted RBP2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 TMPRSS11EQ9UL52 423 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 CDK11AQ9UQ88 783 aaPredicted RBP2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ERBINQ96RT1 1412 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ZNF644Q9H582 1327 aaPredicted RBP2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 IQGAP3Q86VI3 1631 aa2.64□□□□□ -1.99
CBX3P4-201ENST00000538909 ZNF142P52746 1687 aaPredicted RBP2.63□□□□□ -1.99
CBX3P4-201ENST00000538909 DUOX2Q9NRD8 1548 aa2.63□□□□□ -1.99
CBX3P4-201ENST00000538909 HFM1A2PYH4 1435 aa2.63□□□□□ -1.99
CBX3P4-201ENST00000538909 NAIPQ13075 1403 aa2.63□□□□□ -1.99
CBX3P4-201ENST00000538909 FAM83GA6ND36 823 aa2.63□□□□□ -1.99
CBX3P4-201ENST00000538909 SMIM22K7EJ46 135 aa2.63□□□□□ -1.99
CBX3P4-201ENST00000538909 DNAJC8O75937 253 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms