RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 RBAKQ9NYW8 714 aaPredicted RBP12.71□□□□□ -0.38
CPNE8-203ENST00000538596 NAALADL1Q9UQQ1 740 aa12.71□□□□□ -0.38
CPNE8-203ENST00000538596 DNAJC8O75937 253 aaPredicted RBP12.7□□□□□ -0.38
CPNE8-203ENST00000538596 UBOX5O94941 541 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 CLDN10P78369 228 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 TMEM132BQ14DG7 1078 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 SNCBQ16143 134 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 P3H1Q32P28 736 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 TBC1D1Q86TI0 1168 aaPredicted RBP12.7□□□□□ -0.38
CPNE8-203ENST00000538596 CEP57Q86XR8 500 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 RHOT1Q8IXI2 618 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 ABRAQ8N0Z2 381 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 RBBP8NLQ8NC74 664 aaPredicted RBP12.7□□□□□ -0.38
CPNE8-203ENST00000538596 RDM1Q8NG50 284 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 NSUN6Q8TEA1 469 aaKnown RBP12.7□□□□□ -0.38
CPNE8-203ENST00000538596 GRK7Q8WTQ7 553 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 FBXO40Q9UH90 709 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 SLC12A4Q9UP95 1085 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 CHUKO15111 745 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 MYBL1P10243 752 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 GLRA2P23416 452 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 PSMC4P43686 418 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 ELF3P78545 371 aaPredicted RBP12.7□□□□□ -0.38
CPNE8-203ENST00000538596 E2F5Q15329 346 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 ZNF394Q53GI3 561 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 TMEM63BQ5T3F8 832 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 TXNRD3NBQ6F5E7 133 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 CIAPIN1Q6FI81 312 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 CAPN12Q6ZSI9 719 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 REPS2Q8NFH8 660 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 TCP11Q8WWU5 503 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 HAUS1Q96CS2 278 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 FAM81BQ96LP2 452 aa12.7□□□□□ -0.38
CPNE8-203ENST00000538596 ZNF214Q9UL59 606 aaPredicted RBP12.7□□□□□ -0.38
CPNE8-203ENST00000538596 ATF7P17544 494 aaPredicted RBP12.69□□□□□ -0.38
CPNE8-203ENST00000538596 BACE1P56817 501 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 NOP14P78316 857 aaKnown RBP12.69□□□□□ -0.38
CPNE8-203ENST00000538596 PTP4A2Q12974 167 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 STRN3Q13033 797 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 ZNF677Q86XU0 584 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 A1CFQ9NQ94 594 aaKnown RBP12.69□□□□□ -0.38
CPNE8-203ENST00000538596 DNPEPQ9ULA0 475 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.69□□□□□ -0.38
CPNE8-203ENST00000538596 GSTTP1A0A1W2PQM5 241 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 OAS1P00973 400 aaKnown RBP12.69□□□□□ -0.38
CPNE8-203ENST00000538596 FASTKD3Q14CZ7 662 aaKnown RBP12.69□□□□□ -0.38
CPNE8-203ENST00000538596 CCNG2Q16589 344 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 LIN9Q5TKA1 542 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 MIS18BP1Q6P0N0 1132 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.69□□□□□ -0.38
CPNE8-203ENST00000538596 P3H4Q92791 437 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 TRIM11Q96F44 468 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 RBM15Q96T37 977 aaKnown RBP eCLIP12.69□□□□□ -0.38
CPNE8-203ENST00000538596 MSTO1Q9BUK6 570 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 NSRP1Q9H0G5 558 aaKnown RBP12.69□□□□□ -0.38
CPNE8-203ENST00000538596 CYP39A1Q9NYL5 469 aa12.69□□□□□ -0.38
CPNE8-203ENST00000538596 K7ERI5 159 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 PSTPIP1O43586 416 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 CST3P01034 146 aaPredicted RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 CLTAP09496 248 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 KLRC2P26717 231 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 TNFSF9P41273 254 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 RTP1P59025 263 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 BPIFB4P59827 614 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 PLEKHA7Q6IQ23 1121 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 MFSD7Q6UXD7 560 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 SYDE1Q6ZW31 735 aaPredicted RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 PNMA8AQ86V59 439 aaPredicted RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 KATNAL2Q8IYT4 538 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 MAIP1Q8WWC4 291 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 MRRFQ96E11 262 aaKnown RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 THOC1Q96FV9 657 aaKnown RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 USP15Q9Y4E8 981 aaPredicted RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 F8VP50 259 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 MAN1A1P33908 653 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 KCNJ2P63252 427 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 ZNF252P-AS1Q0IIN9 211 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 NFX1Q12986 1120 aaKnown RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 TMED2Q15363 201 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 CGB2Q6NT52 195 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 CCDC63Q8NA47 563 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 TGS1Q96RS0 853 aaKnown RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 PAIP2Q9BPZ3 127 aaKnown RBP12.68□□□□□ -0.38
CPNE8-203ENST00000538596 KIF9Q9HAQ2 790 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 HACL1Q9UJ83 578 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 IVNS1ABPQ9Y6Y0 642 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 PARP14Q460N5 1801 aa12.68□□□□□ -0.38
CPNE8-203ENST00000538596 MGRN1O60291 552 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 SPAG7O75391 227 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 SUPT20HL2P0C7V6 817 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 OGDHQ02218 1023 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 SUPT20HL1Q3ZLR7 823 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 XKR3Q5GH77 459 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 CCDC89Q8N998 374 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 DEPTORQ8TB45 409 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 FEZF2Q8TBJ5 459 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 CKAP2Q8WWK9 683 aa12.67□□□□□ -0.38
CPNE8-203ENST00000538596 ZNF606Q8WXB4 792 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms