RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 KRT82Q9NSB4 513 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 DCTN4Q9UJW0 460 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 COL24A1Q17RW2 1714 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 THSD7AQ9UPZ6 1657 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 FOSP01100 380 aaPredicted RBP19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 CYP11B1P15538 503 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 SLC1A1P43005 524 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 P3H1Q32P28 736 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 KRT27Q7Z3Y8 459 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 DTX3LQ8TDB6 740 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 SHC3Q92529 594 aa19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 DDX27Q96GQ7 796 aaKnown RBP19.67■□□□□ 0.74
SFSWAP-207ENST00000538548 FOCADQ5VW36 1801 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 A8MXQ7 604 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 SLITRK3O94933 977 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 MAPK6Q16659 721 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 ACAD10Q6JQN1 1059 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 SCYL3Q8IZE3 742 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 WDR60Q8WVS4 1066 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 NCSTNQ92542 709 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 KREMEN1Q96MU8 473 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 SLC24A2Q9UI40 661 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 COL5A3P25940 1745 aaPredicted RBP19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 DNAJC6O75061 913 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 PYGLP06737 847 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 RALAP11233 206 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 PLS3P13797 630 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 ADSSP30520 456 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 CETN2P41208 172 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 DAB2IPQ5VWQ8 1189 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 C15orf52Q6ZUT6 534 aaKnown RBP19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 STRA6Q9BX79 667 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 VCX3BQ9H321 246 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 VCX3AQ9NNX9 186 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 KCND2Q9NZV8 630 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 HEY2Q9UBP5 337 aa19.66■□□□□ 0.74
SFSWAP-207ENST00000538548 MYH11P35749 1972 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 ONECUT3O60422 494 aaPredicted RBP19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 ZBED4O75132 1171 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 LYNP07948 512 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 PICALMQ13492 652 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 TRAPPC3LQ5T215 181 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 KBTBD2Q8IY47 623 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 PPM1KQ8N3J5 372 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 RFWD2Q8NHY2 731 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 HEMGNQ9BXL5 484 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 TRIM55Q9BYV6 548 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 PSMC3IPQ9P2W1 217 aaPredicted RBP19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 SLC4A7Q9Y6M7 1214 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 UMODL1Q5DID0 1318 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 MXI1P50539 228 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 MFAP3P55082 362 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 PTP4A2Q12974 167 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 WDR72Q3MJ13 1102 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 C1orf220Q5T0J3 134 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 CYP2W1Q8TAV3 490 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 DYDC2Q96IM9 177 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 MAK16Q9BXY0 300 aaKnown RBP19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 CD209Q9NNX6 404 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 TAS2R1Q9NYW7 299 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 SERPINB13Q9UIV8 391 aa19.65■□□□□ 0.74
SFSWAP-207ENST00000538548 A0A0G2JND7 137 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 A0A1W2PPM1 405 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 ZBTB39O15060 712 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 ADRA2BP18089 450 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 KRT4P19013 534 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 KRT72Q14CN4 511 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 GSTA5Q7RTV2 222 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 ARHGAP24Q8N264 748 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 FAM81BQ96LP2 452 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 GPR101Q96P66 508 aaPredicted RBP19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 ANGPTL2Q9UKU9 493 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 PMM2O15305 246 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 UBTFL6P0CB48 400 aaPredicted RBP19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 ADRA1DP25100 572 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 CERKLQ49MI3 558 aaPredicted RBP19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 ZC3H12AQ5D1E8 599 aaKnown RBP19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 RASIP1Q5U651 963 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 TPTE2Q6XPS3 522 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 PDCD7Q8N8D1 485 aaKnown RBP19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 NDNQ99608 321 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 SPATA16Q9BXB7 569 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 ASCC2Q9H1I8 757 aaPredicted RBP19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 VPS37BQ9H9H4 285 aa19.64■□□□□ 0.73
SFSWAP-207ENST00000538548 ZNFX1Q9P2E3 1918 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 RANBP1P43487 201 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 OVGP1Q12889 678 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 CNPY1Q3B7I2 92 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 MFSD14BQ5SR56 506 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 CCDC62Q6P9F0 684 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 TMEM174Q8WUU8 243 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 SKA1Q96BD8 255 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 OPTNQ96CV9 577 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 IWS1Q96ST2 819 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 FAM118BQ9BPY3 351 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 LBHD1Q9BQE6 289 aaPredicted RBP19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 OSBPL8Q9BZF1 889 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 UBE2OQ9C0C9 1292 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 PCIF1Q9H4Z3 704 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 DNALI1O14645 258 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms