RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 LRRN2O75325 713 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 VNN1O95497 513 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SKILP12757 684 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CD58P19256 250 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TNFAIP3P21580 790 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 RPL9P32969 192 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SOX5P35711 763 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 OR1G1P47890 313 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 BPIFB4P59827 614 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TUSC3Q13454 348 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CUL2Q13617 745 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PAN2Q504Q3 1202 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 C9orf57Q5W0N0 161 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PHLDB3Q6NSJ2 640 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CYP26C1Q6V0L0 522 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 C15orf39Q6ZRI6 1047 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 OTOP2Q7RTS6 562 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 METTL23Q86XA0 190 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TMTC1Q8IUR5 882 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GPIHBP1Q8IV16 184 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LRRC8AQ8IWT6 810 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TTC39CQ8N584 583 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LRRC52Q8N7C0 313 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ELMO3Q96BJ8 720 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CCDC42Q96M95 316 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ZMAT2Q96NC0 199 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 COLEC11Q9BWP8 271 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 NIF3L1Q9GZT8 377 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GANQ9H2C0 597 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SNX25Q9H3E2 840 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FBXL5Q9UKA1 691 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 MYO6Q9UM54 1294 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SNX9Q9Y5X1 595 aa11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 BZW2Q9Y6E2 419 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TRIP11Q15643 1979 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 KPNA7A9QM74 516 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PODXLO00592 558 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 EPHB6O15197 1021 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TADA2AO75478 443 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 BAIAP3O94812 1187 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ASS1P00966 412 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ALDH2P05091 517 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SERPING1P05155 500 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 MSNP26038 577 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CYLC1P35663 651 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 MCCD1P59942 119 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GCNT1Q02742 428 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PTK2Q05397 1052 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GPNMBQ14956 572 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SPA17Q15506 151 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 XKR4Q5GH76 650 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PSRC1Q6PGN9 363 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 UBE2Q1Q7Z7E8 422 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ZNF598Q86UK7 904 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TC2NQ8N9U0 490 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 OR6B3Q8NGW1 331 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LMO3Q8TAP4 145 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LINC01599Q8WXQ3 324 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 RSPH1Q8WYR4 309 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PPP1R10Q96QC0 940 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 GOLGA2P5Q9HBQ8 144 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SIX2Q9NPC8 291 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LUC7LQ9NQ29 371 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 MIOSQ9NXC5 875 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 POLIQ9UNA4 740 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ANK1P16157 1881 aa11.42□□□□□ -0.58
TNFRSF1A-211ENST00000538363 RALGAPA2Q2PPJ7 1873 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FOXN3O00409 490 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PTGESO14684 152 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TRAPPC3O43617 180 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 B3GAT3O94766 335 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 NOL4O94818 638 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 WEE2P0C1S8 567 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CD19P15391 556 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PAX3P23760 479 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CLCNKBP51801 687 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ZBTB6Q15916 424 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PRPF38BQ5VTL8 546 aaKnown RBP11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 DCLRE1AQ6PJP8 1040 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TMEM270Q6UE05 265 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 ZNF365Q70YC5 407 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 APPL2Q8NEU8 664 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 RABGGTAQ92696 567 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SYN2Q92777 582 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 JAKMIP2Q96AA8 810 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 YME1L1Q96TA2 773 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CXCL16Q9H2A7 254 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CYP3A43Q9HB55 503 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SIX4Q9UIU6 781 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 FAN1Q9Y2M0 1017 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 SLC4A7Q9Y6M7 1214 aa11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 TDRD15B5MCY1 1934 aaKnown RBP11.41□□□□□ -0.58
TNFRSF1A-211ENST00000538363 F8VZ95 297 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 PIRO00625 290 aa11.4□□□□□ -0.58
TNFRSF1A-211ENST00000538363 CYB561D2O14569 222 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms