RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 MAP3K7O43318 606 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 C4BPAP04003 597 aaKnown RBP11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 NFICP08651 508 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 SLC11A1P49279 550 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 ZNF445P59923 1031 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 TPM4P67936 248 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 CREMQ03060 361 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 TRPC3Q13507 836 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 SGSM1Q2NKQ1 1148 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 ZACNQ401N2 412 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 SV2CQ496J9 727 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 ANO6Q4KMQ2 910 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 KRT39Q6A163 491 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 LRSAM1Q6UWE0 723 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 TRAPPC11Q7Z392 1133 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 TRIM59Q8IWR1 403 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 EFCAB13Q8IY85 973 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 KLHL23Q8NBE8 558 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 CCDC150Q8NCX0 1101 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 APPL2Q8NEU8 664 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 PPP2R3CQ969Q6 453 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 MED15Q96RN5 788 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 IMPG2Q9BZV3 1241 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 DNAJC25Q9H1X3 360 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 TMEM8AQ9HCN3 771 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 DSEQ9UL01 958 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 COQ4Q9Y3A0 265 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 NFE2L3Q9Y4A8 694 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 NUB1Q9Y5A7 615 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 IRAK3Q9Y616 596 aa11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 PDCD11Q14690 1871 aaKnown RBP11.9□□□□□ -0.5
AC087235.1-201ENST00000538297 GBF1Q92538 1859 aa11.9□□□□□ -0.51
AC087235.1-201ENST00000538297 LRRIQ3A6PVS8 624 aaPredicted RBP11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 PHACTR2O75167 634 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 EFEMP2O95967 443 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 P4HA1P13674 534 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 AARSP49588 968 aaKnown RBP eCLIP11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 TAF6P49848 677 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 CLCNKBP51801 687 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 LILRA4P59901 499 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 SOX4Q06945 474 aaPredicted RBP11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 GPM6BQ13491 265 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 USP41Q3LFD5 358 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 C15orf39Q6ZRI6 1047 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 SV2AQ7L0J3 742 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 TTC39CQ8N584 583 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 C1orf127Q8N9H9 656 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 SPPL3Q8TCT6 385 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 SLC35C1Q96A29 364 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 C18orf25Q96B23 403 aaPredicted RBP11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 SUSD3Q96L08 255 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 C17orf80Q9BSJ5 609 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 DNAI2Q9GZS0 605 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 CHST7Q9NS84 486 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 GDAP2Q9NXN4 497 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 ANK1P16157 1881 aa11.89□□□□□ -0.51
AC087235.1-201ENST00000538297 GTPBP10A4D1E9 387 aaKnown RBP11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 CASTOR2A6NHX0 329 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 KPNA7A9QM74 516 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 M0QZQ0 153 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 LPXNO60711 386 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 SOD2P04179 222 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 ITGB1P05556 798 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 TCP11X2Q5H9J9 407 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 CDKAL1Q5VV42 579 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 TCERG1LQ5VWI1 586 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 FUT10Q6P4F1 479 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 IRF2BP1Q8IU81 584 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 RNF168Q8IYW5 571 aaPredicted RBP11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 TMEM86AQ8N2M4 240 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 FBXL13Q8NEE6 735 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 CXorf38Q8TB03 319 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 FAM200AQ8TCP9 573 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 ARNTL2Q8WYA1 636 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 ZNF516Q92618 1163 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 MRPL38Q96DV4 380 aaKnown RBP11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 EEF2KMTQ96G04 330 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 HPDLQ96IR7 371 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 CNOT6LQ96LI5 555 aaKnown RBP11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 FAM81BQ96LP2 452 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 TUBGCP4Q9UGJ1 667 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 AGAP1Q9UPQ3 857 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 NLRC5Q86WI3 1866 aa11.88□□□□□ -0.51
AC087235.1-201ENST00000538297 GOLGA6L19H0YKK7 550 aa11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 H7C4K7 107 aa11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 NCK2O43639 380 aa11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 B4GALT3O60512 393 aa11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 AFPP02771 609 aaKnown RBP11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 ITGB3P05106 788 aa11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 CYP11A1P05108 521 aa11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 CTSAP10619 480 aa11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 TYMPP19971 482 aa11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 CDK11BP21127 795 aaKnown RBP11.87□□□□□ -0.51
AC087235.1-201ENST00000538297 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms