RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 ODC1P11926 461 aa23.24■■□□□ 1.31
CCDC78-215ENST00000538176 PTPN2P17706 415 aa23.24■■□□□ 1.31
CCDC78-215ENST00000538176 PLA2G5P39877 138 aa23.24■■□□□ 1.31
CCDC78-215ENST00000538176 ARPP19P56211 112 aa23.24■■□□□ 1.31
CCDC78-215ENST00000538176 KCNA1Q09470 495 aa23.24■■□□□ 1.31
CCDC78-215ENST00000538176 FOXD4L6Q3SYB3 417 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-215ENST00000538176 RESP18Q5W5W9 173 aa23.24■■□□□ 1.31
CCDC78-215ENST00000538176 CRELD2Q6UXH1 353 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-215ENST00000538176 FOXD4L3Q6VB84 417 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-215ENST00000538176 GET4Q7L5D6 327 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-215ENST00000538176 CYP4F11Q9HBI6 524 aa23.24■■□□□ 1.31
CCDC78-215ENST00000538176 DPP3Q9NY33 737 aa23.24■■□□□ 1.31
CCDC78-215ENST00000538176 TISP43B9A030 160 aa23.23■■□□□ 1.31
CCDC78-215ENST00000538176 EIF3DO15371 548 aaKnown RBP eCLIP23.23■■□□□ 1.31
CCDC78-215ENST00000538176 EXTL3O43909 919 aa23.23■■□□□ 1.31
CCDC78-215ENST00000538176 NFICP08651 508 aa23.23■■□□□ 1.31
CCDC78-215ENST00000538176 SNRPFP62306 86 aaKnown RBP23.23■■□□□ 1.31
CCDC78-215ENST00000538176 ASIC1P78348 528 aa23.23■■□□□ 1.31
CCDC78-215ENST00000538176 DNM1Q05193 864 aaKnown RBP23.23■■□□□ 1.31
CCDC78-215ENST00000538176 MYBPC2Q14324 1141 aa23.23■■□□□ 1.31
CCDC78-215ENST00000538176 PABPC1LQ4VXU2 614 aaKnown RBP23.23■■□□□ 1.31
CCDC78-215ENST00000538176 ELMOD1Q8N336 334 aa23.23■■□□□ 1.31
CCDC78-215ENST00000538176 FAM213AQ9BRX8 229 aa23.23■■□□□ 1.31
CCDC78-215ENST00000538176 KIAA1586Q9HCI6 787 aa23.23■■□□□ 1.31
CCDC78-215ENST00000538176 PVALEFA0A1B0GWK0 134 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 ANHXE9PGG2 379 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 ZNF197O14709 1029 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 MICAL2O94851 1124 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 CPB1P15086 417 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 PNPLA4P41247 253 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 TAF6P49848 677 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 CASP5P51878 434 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 PKP1Q13835 747 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 SURF1Q15526 300 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 OVOS1Q6IE37 1185 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 IQCEQ6IPM2 695 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 ARMCX5Q6P1M9 558 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 UNC13DQ70J99 1090 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 MTSS1LQ765P7 747 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 BRSK2Q8IWQ3 736 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 CEP57L1Q8IYX8 460 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 SLC44A3Q8N4M1 653 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 LEMD2Q8NC56 503 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 SENP8Q96LD8 212 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 DNMT3BQ9UBC3 853 aaKnown RBP23.22■■□□□ 1.31
CCDC78-215ENST00000538176 WNT16Q9UBV4 365 aa23.22■■□□□ 1.31
CCDC78-215ENST00000538176 PRPF6O94906 941 aaKnown RBP23.21■■□□□ 1.31
CCDC78-215ENST00000538176 CYP11A1P05108 521 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 KRT85P78386 507 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 ADCY1Q08828 1119 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 GPR17Q13304 367 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 PLD1Q13393 1074 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 METTL23Q86XA0 190 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 GPD1LQ8N335 351 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 ZNF507Q8TCN5 953 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 FGF13Q92913 245 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 ZNF512Q96ME7 567 aaPredicted RBP23.21■■□□□ 1.31
CCDC78-215ENST00000538176 ZNF560Q96MR9 790 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 IRF2BPLQ9H1B7 796 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 RBAKQ9NYW8 714 aaPredicted RBP23.21■■□□□ 1.31
CCDC78-215ENST00000538176 GDE1Q9NZC3 331 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 HSFX1Q9UBD0 423 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 USP25Q9UHP3 1055 aa23.21■■□□□ 1.31
CCDC78-215ENST00000538176 UBE4BO95155 1302 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 SRFP11831 508 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 AVPR2P30518 371 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 GUCY2FP51841 1108 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 SMARCB1Q12824 385 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 FAM26FQ5R3K3 315 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 THEM5Q8N1Q8 247 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 MFSD1Q9H3U5 465 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 CGNQ9P2M7 1197 aaKnown RBP23.2■■□□□ 1.3
CCDC78-215ENST00000538176 MRPS23Q9Y3D9 190 aaKnown RBP23.2■■□□□ 1.3
CCDC78-215ENST00000538176 INSL5Q9Y5Q6 135 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 DOCK8Q8NF50 2099 aa23.2■■□□□ 1.3
CCDC78-215ENST00000538176 MYL1P05976 194 aa23.19■■□□□ 1.3
CCDC78-215ENST00000538176 RHOP08100 348 aa23.19■■□□□ 1.3
CCDC78-215ENST00000538176 SLFN14P0C7P3 912 aa23.19■■□□□ 1.3
CCDC78-215ENST00000538176 CMA1P23946 247 aa23.19■■□□□ 1.3
CCDC78-215ENST00000538176 CLCN5P51795 746 aa23.19■■□□□ 1.3
CCDC78-215ENST00000538176 SV2CQ496J9 727 aa23.19■■□□□ 1.3
CCDC78-215ENST00000538176 CYP4A22Q5TCH4 519 aa23.19■■□□□ 1.3
CCDC78-215ENST00000538176 SPATA32Q96LK8 384 aa23.19■■□□□ 1.3
CCDC78-215ENST00000538176 FBXL21Q9UKT6 434 aa23.19■■□□□ 1.3
CCDC78-215ENST00000538176 R3HCC1Q9Y3T6 440 aaKnown RBP23.19■■□□□ 1.3
CCDC78-215ENST00000538176 TIMM13Q9Y5L4 95 aaPredicted RBP23.19■■□□□ 1.3
CCDC78-215ENST00000538176 ZNF233A6NK53 670 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 KPNA7A9QM74 516 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 SEC24AO95486 1093 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 NTHL1P78549 312 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 HTR4Q13639 388 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 BECN1Q14457 450 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 EPM2AIP1Q7L775 607 aaPredicted RBP23.18■■□□□ 1.3
CCDC78-215ENST00000538176 SAAL1Q96ER3 474 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 CBWD1Q9BRT8 395 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 SCAND2PQ9GZW5 306 aaPredicted RBP23.18■■□□□ 1.3
CCDC78-215ENST00000538176 IKZF4Q9H2S9 585 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 ZNF318Q5VUA4 2279 aa23.18■■□□□ 1.3
CCDC78-215ENST00000538176 ANK1P16157 1881 aa23.17■■□□□ 1.3
CCDC78-215ENST00000538176 CYB561D2O14569 222 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms