RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 SCUBE1Q8IWY4 988 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 DAGLBQ8NCG7 672 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 GLIS3Q8NEA6 775 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 RBM46Q8TBY0 533 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 ACER1Q8TDN7 264 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 U2AF1L4Q8WU68 220 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 NMD3Q96D46 503 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 CORO1BQ9BR76 489 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 RIOX1Q9H6W3 641 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 SPATA7Q9P0W8 599 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 ZBTB21Q9ULJ3 1066 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 NAALADL1Q9UQQ1 740 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 F5H6K3 240 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 CDH16O75309 829 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 TECP42680 631 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 HIRAP54198 1017 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 KCNH2Q12809 1159 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 CYLC2Q14093 348 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 GRM2Q14416 872 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 PDK4Q16654 411 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 C9orf131Q5VYM1 1079 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 SLFN13Q68D06 897 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 VPS52Q8N1B4 723 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 DIS3LQ8TF46 1054 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 LARP4BQ92615 738 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 ALG3Q92685 438 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 LBHD1Q9BQE6 289 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 POLR3CQ9BUI4 534 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 OXCT2Q9BYC2 517 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 BARHL2Q9NY43 387 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 SUN2Q9UH99 717 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 FZD1Q9UP38 647 aa12.02□□□□□ -0.49
SEMA4D-221ENST00000537934 F8W8V4 182 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 TBC1D12O60347 775 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 OPHN1O60890 802 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 GRB10Q13322 594 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 PPP2R5CQ13362 524 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 THOC5Q13769 683 aaKnown RBP12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 HNRNPDQ14103 355 aaKnown RBP12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 SPARCL1Q14515 664 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 SLC44A4Q53GD3 710 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 NBPF12Q5TAG4 269 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 B3GNT6Q6ZMB0 384 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 ADGRF4Q8IZF3 695 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 DENND1AQ8TEH3 1009 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 NSL1Q96IY1 281 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 GLIS2Q9BZE0 524 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 LRRC27Q9C0I9 530 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 BRD8Q9H0E9 1235 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 TIMMDC1Q9NPL8 285 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 CLIC5Q9NZA1 410 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 DNAJB4Q9UDY4 337 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 DDX25Q9UHL0 483 aaKnown RBP12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 NPHP3-ACAD11A0A0J9YXS1 232 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 NDUFB10O96000 172 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 ANPEPP15144 967 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 SLC9A1P19634 815 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 VARSP26640 1264 aaKnown RBP12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 COILP38432 576 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 CAP2P40123 477 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 GRIA2P42262 883 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 TXKP42681 527 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 SLC18A1P54219 525 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 ADCY1Q08828 1119 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 CYP1B1Q16678 543 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 CCDC105Q8IYK2 499 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 SCYL3Q8IZE3 742 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 JMJD4Q9H9V9 463 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 GGA3Q9NZ52 723 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 WHRNQ9P202 907 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 TBK1Q9UHD2 729 aa12.01□□□□□ -0.49
SEMA4D-221ENST00000537934 USP17L10C9JJH3 530 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 BCRP11274 1271 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 CETPP11597 493 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 CYP11B2P19099 503 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 OXCT1P55809 520 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 CTTNQ14247 550 aaKnown RBP12□□□□□ -0.49
SEMA4D-221ENST00000537934 ZYXQ15942 572 aaKnown RBP12□□□□□ -0.49
SEMA4D-221ENST00000537934 KYNUQ16719 465 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 KBTBD12Q3ZCT8 623 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 TMEM63BQ5T3F8 832 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 SYDE2Q5VT97 1194 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 TCERG1LQ5VWI1 586 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 AADACL2Q6P093 401 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 CCDC80Q76M96 950 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 SATL1Q86VE3 508 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 ZDHHC14Q8IZN3 488 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 PDCD7Q8N8D1 485 aaKnown RBP12□□□□□ -0.49
SEMA4D-221ENST00000537934 SLC30A5Q8TAD4 765 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 UBN1Q9NPG3 1134 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 EMILIN3Q9NT22 766 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 ARL8BQ9NVJ2 186 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 TBCCD1Q9NVR7 557 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 TMOD4Q9NZQ9 345 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 RASA4BC9J798 803 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 PRPF4O43172 522 aaKnown RBP eCLIP12□□□□□ -0.49
SEMA4D-221ENST00000537934 RASA4O43374 803 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 PPP1R11O60927 126 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms