RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 DSTYKQ6XUX3 929 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 FMR1NBQ8N0W7 255 aaPredicted RBP14.24□□□□□ -0.13
PRKDC-206ENST00000536429 RDH13Q8NBN7 331 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 APPL2Q8NEU8 664 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 OR5B17Q8NGF7 314 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 SLC7A14Q8TBB6 771 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 SMG7Q92540 1137 aaKnown RBP14.24□□□□□ -0.13
PRKDC-206ENST00000536429 BORCS6Q96GS4 357 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 SENP8Q96LD8 212 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 C11orf16Q9NQ32 467 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 ZDHHC7Q9NXF8 308 aa14.24□□□□□ -0.13
PRKDC-206ENST00000536429 H7C4K7 107 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 CCL16O15467 120 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 N4BP1O75113 896 aaKnown RBP14.23□□□□□ -0.13
PRKDC-206ENST00000536429 SEC24AO95486 1093 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 POLR2BP30876 1174 aaKnown RBP14.23□□□□□ -0.13
PRKDC-206ENST00000536429 NTHL1P78549 312 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 SNW1Q13573 536 aaKnown RBP14.23□□□□□ -0.13
PRKDC-206ENST00000536429 LIN9Q5TKA1 542 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 ZNF280DQ6N043 979 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 ENGASEQ8NFI3 743 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 TMEM209Q96SK2 561 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 PRKD2Q9BZL6 878 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 MTMR12Q9C0I1 747 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 GZF1Q9H116 711 aaPredicted RBP14.23□□□□□ -0.13
PRKDC-206ENST00000536429 DPP7Q9UHL4 492 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 SIX4Q9UIU6 781 aa14.23□□□□□ -0.13
PRKDC-206ENST00000536429 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.23□□□□□ -0.13
PRKDC-206ENST00000536429 ZNF233A6NK53 670 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 KIAA0391O15091 583 aaKnown RBP14.22□□□□□ -0.13
PRKDC-206ENST00000536429 DCXO43602 365 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 GADD45BO75293 160 aaPredicted RBP14.22□□□□□ -0.13
PRKDC-206ENST00000536429 ABLIM3O94929 683 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 OAZ2O95190 189 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 VNN2O95498 520 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 ITGB3P05106 788 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 MYL1P05976 194 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 CDR1P51861 262 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 YWHAHQ04917 246 aaPredicted RBP14.22□□□□□ -0.13
PRKDC-206ENST00000536429 PNOCQ13519 176 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 SNRNP35Q16560 246 aaKnown RBP14.22□□□□□ -0.13
PRKDC-206ENST00000536429 PPM1LQ5SGD2 360 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 CCDC149Q6ZUS6 474 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 GRASPQ7Z6J2 395 aaPredicted RBP14.22□□□□□ -0.13
PRKDC-206ENST00000536429 NT5DC4Q86YG4 428 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 PLEKHO2Q8TD55 490 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 ERCC4Q92889 916 aaPredicted RBP14.22□□□□□ -0.13
PRKDC-206ENST00000536429 KCTD10Q9H3F6 313 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 WDR6Q9NNW5 1121 aaKnown RBP14.22□□□□□ -0.13
PRKDC-206ENST00000536429 CIZ1Q9ULV3 898 aaPredicted RBP14.22□□□□□ -0.13
PRKDC-206ENST00000536429 AGAP1Q9UPQ3 857 aa14.22□□□□□ -0.13
PRKDC-206ENST00000536429 CLUHO75153 1309 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 ANK1P16157 1881 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 CYB561D2O14569 222 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 RHOBTB3O94955 611 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 ASGR2P07307 311 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 ODC1P11926 461 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 TYMPP19971 482 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 TAF6P49848 677 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 CYP24A1Q07973 514 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 PSMD2Q13200 908 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 WSCD1Q658N2 575 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 OVOS1Q6IE37 1185 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 ELMSAN1Q6PJG2 1045 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 RNF19BQ6ZMZ0 732 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 C12orf56Q8IXR9 622 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 CSGALNACT2Q8N6G5 542 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 TDRD5Q8NAT2 981 aaKnown RBP14.21□□□□□ -0.13
PRKDC-206ENST00000536429 XXYLT1Q8NBI6 393 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 ST13P5Q8NFI4 369 aaPredicted RBP14.21□□□□□ -0.13
PRKDC-206ENST00000536429 OR10T2Q8NGX3 314 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 ZNF461Q8TAF7 563 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 MYADMQ96S97 322 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 RTP3Q9BQQ7 232 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 RHOBTB2Q9BYZ6 727 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 CRISPLD1Q9H336 500 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 SMOC2Q9H3U7 446 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 PIDD1Q9HB75 910 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 INTS13Q9NVM9 706 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 HCFC1R1Q9NWW0 138 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 POLIQ9UNA4 740 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 MAPK8IP1Q9UQF2 711 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 NR2E1Q9Y466 385 aa14.21□□□□□ -0.13
PRKDC-206ENST00000536429 GOLGA6L4A6NEF3 574 aa14.2□□□□□ -0.14
PRKDC-206ENST00000536429 NRG2O14511 850 aaPredicted RBP14.2□□□□□ -0.14
PRKDC-206ENST00000536429 CYP11A1P05108 521 aa14.2□□□□□ -0.14
PRKDC-206ENST00000536429 HNRNPA1P09651 372 aaKnown RBP eCLIP14.2□□□□□ -0.14
PRKDC-206ENST00000536429 TMEM191BP0C7N4 346 aa14.2□□□□□ -0.14
PRKDC-206ENST00000536429 DLATP10515 647 aaKnown RBP14.2□□□□□ -0.14
PRKDC-206ENST00000536429 CPB1P15086 417 aa14.2□□□□□ -0.14
PRKDC-206ENST00000536429 ATF2P15336 505 aa14.2□□□□□ -0.14
PRKDC-206ENST00000536429 CASP4P49662 377 aa14.2□□□□□ -0.14
PRKDC-206ENST00000536429 SNRPFP62306 86 aaKnown RBP14.2□□□□□ -0.14
PRKDC-206ENST00000536429 ADCY1Q08828 1119 aa14.2□□□□□ -0.14
PRKDC-206ENST00000536429 CYP26C1Q6V0L0 522 aa14.2□□□□□ -0.14
PRKDC-206ENST00000536429 USP37Q86T82 979 aa14.2□□□□□ -0.14
PRKDC-206ENST00000536429 SMYD4Q8IYR2 804 aaPredicted RBP14.2□□□□□ -0.14
PRKDC-206ENST00000536429 CACTINQ8WUQ7 758 aaKnown RBP14.2□□□□□ -0.14
PRKDC-206ENST00000536429 CCDC127Q96BQ5 260 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms