RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SERINC5Q86VE9 423 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 WDTC1Q8N5D0 677 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 NOA1Q8NC60 698 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 PNKPQ96T60 521 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 SENP6Q9GZR1 1112 aaPredicted RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 NIF3L1Q9GZT8 377 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 CXCL16Q9H2A7 254 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 LHX5Q9H2C1 402 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 ITGA11Q9UKX5 1188 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 ZNF185O15231 689 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 TOMM70O94826 608 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 LSM8O95777 96 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 GNRH1P01148 92 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 RPLP2P05387 115 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 MYBL1P10243 752 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 TMOD1P28289 359 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 PIK3CAP42336 1068 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 MNAT1P51948 309 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 CRYBB1P53674 252 aaPredicted RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 PTPN11Q06124 597 aaPredicted RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 DUOXA2Q1HG44 320 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 ZNF568Q3ZCX4 644 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 VPS36Q86VN1 386 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 MCOLN2Q8IZK6 566 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 PXYLP1Q8TE99 480 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 OSGEPQ9NPF4 335 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 ACP6Q9NPH0 428 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 C1orf112Q9NSG2 853 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 SETD4Q9NVD3 440 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 ANKFY1Q9P2R3 1169 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 UVRAGQ9P2Y5 699 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 MYO16Q9Y6X6 1858 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 SRGAP2O75044 1071 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 IPO7O95373 1038 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 CFHP08603 1231 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 PAEPP09466 180 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 CXCL8P10145 99 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 DLATP10515 647 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 MAN1A1P33908 653 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 CTNNA1P35221 906 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 CACNB2Q08289 660 aaPredicted RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 NOGQ13253 232 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 SNX17Q15036 470 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 SIX1Q15475 284 aaPredicted RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 JADE1Q6IE81 842 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 EIF1ADQ8N9N8 165 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 SMG8Q8ND04 991 aaKnown RBP8.55□□□□□ -1.04
COL21A1-212ENST00000535941 WNT8BQ93098 351 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 PBKQ96KB5 322 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 SUGCTQ9HAC7 445 aa8.55□□□□□ -1.04
COL21A1-212ENST00000535941 MAP2K7O14733 419 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 ATP8B1O43520 1251 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 BUB1BO60566 1050 aaPredicted RBP8.54□□□□□ -1.04
COL21A1-212ENST00000535941 CYP3A5P20815 502 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 BPIFB4P59827 614 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 MYL6P60660 151 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 C1QBPQ07021 282 aaKnown RBP8.54□□□□□ -1.04
COL21A1-212ENST00000535941 CKAP4Q07065 602 aaKnown RBP8.54□□□□□ -1.04
COL21A1-212ENST00000535941 DSC3Q14574 896 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
COL21A1-212ENST00000535941 ARHGAP44Q17R89 818 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 SEZ6Q53EL9 994 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 WDR78Q5VTH9 848 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 LMBRD2Q68DH5 695 aaPredicted RBP8.54□□□□□ -1.04
COL21A1-212ENST00000535941 SLC27A1Q6PCB7 646 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 DNAAF5Q86Y56 855 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 SYCE1Q8N0S2 351 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 NIPA2Q8N8Q9 360 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 U2AF1L4Q8WU68 220 aaKnown RBP8.54□□□□□ -1.04
COL21A1-212ENST00000535941 EXOC4Q96A65 974 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 NLRP4Q96MN2 994 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 ZMAT2Q96NC0 199 aaKnown RBP8.54□□□□□ -1.04
COL21A1-212ENST00000535941 PRDM16Q9HAZ2 1276 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 CYP3A43Q9HB55 503 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 SAGE1Q9NXZ1 904 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 ADAM21Q9UKJ8 722 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 ANKRD65E5RJM6 399 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 PIRO00625 290 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 TREHO43280 583 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 NCK2O43639 380 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 CILPO75339 1184 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 FAM163BP0C2L3 166 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 PDE6CP51160 858 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 GPC5P78333 572 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 CYP1B1Q16678 543 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 MRPL10Q7Z7H8 261 aaKnown RBP8.54□□□□□ -1.04
COL21A1-212ENST00000535941 PPM1KQ8N3J5 372 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 METTL13Q8N6R0 699 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 CPB2Q96IY4 423 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 FNBP1Q96RU3 617 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 ZNF518BQ9C0D4 1074 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 SQORQ9Y6N5 450 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 ALPK3Q96L96 1907 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 DNAH12Q6ZR08 3092 aa8.54□□□□□ -1.04
COL21A1-212ENST00000535941 CENPFP49454 3210 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 DYNC1LI2O43237 492 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-212ENST00000535941 BUB1O43683 1085 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 RAD23BP54727 409 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 PRKCZQ05513 592 aa8.53□□□□□ -1.04
COL21A1-212ENST00000535941 MMS22LQ6ZRQ5 1243 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms