RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 ADAM7Q9H2U9 754 aa23.6■■□□□ 1.37
SSPN-204ENST00000535504 MAPK8IP1Q9UQF2 711 aa23.6■■□□□ 1.37
SSPN-204ENST00000535504 USP15Q9Y4E8 981 aaPredicted RBP23.6■■□□□ 1.37
SSPN-204ENST00000535504 PCDHA5Q9Y5H7 936 aa23.6■■□□□ 1.37
SSPN-204ENST00000535504 CDY1Q9Y6F8 540 aa23.6■■□□□ 1.37
SSPN-204ENST00000535504 EYSQ5T1H1 3165 aa23.6■■□□□ 1.37
SSPN-204ENST00000535504 M0QZQ0 153 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 PIRO00625 290 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 TGM5O43548 720 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 ITGB3P05106 788 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 TYMPP19971 482 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 POLR2BP30876 1174 aaKnown RBP23.59■■□□□ 1.37
SSPN-204ENST00000535504 SSTR3P32745 418 aaPredicted RBP23.59■■□□□ 1.37
SSPN-204ENST00000535504 OR1D2P34982 312 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 AP3M2P53677 418 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 PSMD6Q15008 389 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 CD300LGQ6UXG3 332 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 KREMEN2Q8NCW0 462 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 CLSTN3Q9BQT9 956 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 MTMR12Q9C0I1 747 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 KCTD10Q9H3F6 313 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 INTS13Q9NVM9 706 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 AGAP1Q9UPQ3 857 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 TRAF3IP3Q9Y228 551 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 PRUNE2Q8WUY3 3088 aa23.59■■□□□ 1.37
SSPN-204ENST00000535504 ANO9A1A5B4 782 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 PHACTR2O75167 634 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 AARSP49588 968 aaKnown RBP eCLIP23.58■■□□□ 1.37
SSPN-204ENST00000535504 ARPP19P56211 112 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 RAB33AQ14088 237 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 SYCE2Q6PIF2 218 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 CYP26C1Q6V0L0 522 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 CCDC149Q6ZUS6 474 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 THEM5Q8N1Q8 247 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 LRRC52Q8N7C0 313 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 SENP8Q96LD8 212 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 CGRRF1Q99675 332 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 PIDD1Q9HB75 910 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 ZDHHC7Q9NXF8 308 aa23.58■■□□□ 1.37
SSPN-204ENST00000535504 TCF20Q9UGU0 1960 aaKnown RBP23.58■■□□□ 1.36
SSPN-204ENST00000535504 KPNA7A9QM74 516 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 PSMA7O14818 248 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 KRT13P13646 458 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 CPB1P15086 417 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 NR2F2P24468 414 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 BFSP1Q12934 665 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 TRPC3Q13507 836 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 CBX2Q14781 532 aaPredicted RBP23.57■■□□□ 1.36
SSPN-204ENST00000535504 OVOS1Q6IE37 1185 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 RTL10Q7L3V2 364 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 VWA8A3KMH1 1905 aa23.57■■□□□ 1.36
SSPN-204ENST00000535504 OR6C75A6NL08 312 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 DLL1O00548 723 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 CYB561D2O14569 222 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 HUS1O60921 280 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 NFIL3Q16649 462 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 PPM1LQ5SGD2 360 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 LMBRD2Q68DH5 695 aaPredicted RBP23.56■■□□□ 1.36
SSPN-204ENST00000535504 TMC5Q6UXY8 1006 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 C15orf39Q6ZRI6 1047 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 ADHFE1Q8IWW8 467 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 C1orf127Q8N9H9 656 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 CMASQ8NFW8 434 aaPredicted RBP23.56■■□□□ 1.36
SSPN-204ENST00000535504 TMEM174Q8WUU8 243 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 TSHZ2Q9NRE2 1034 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 FBXW11Q9UKB1 542 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 NR2E1Q9Y466 385 aa23.56■■□□□ 1.36
SSPN-204ENST00000535504 CETN3O15182 167 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 XYLBO75191 536 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 SPATA31D3P0C874 917 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 IGFBP6P24592 240 aaPredicted RBP23.55■■□□□ 1.36
SSPN-204ENST00000535504 ADAM9Q13443 819 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 BIRC3Q13489 604 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 UVSSAQ2YD98 709 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 EDRF1Q3B7T1 1238 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 COBLL1Q53SF7 1204 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 TPGS2Q68CL5 300 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 SLC8B1Q6J4K2 584 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 SPATA31D4Q6ZUB0 917 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 C12orf76Q8N812 135 aaPredicted RBP23.55■■□□□ 1.36
SSPN-204ENST00000535504 ZNF461Q8TAF7 563 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 MFSD14AQ96MC6 490 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 PHF7Q9BWX1 381 aaPredicted RBP23.55■■□□□ 1.36
SSPN-204ENST00000535504 COL25A1Q9BXS0 654 aaPredicted RBP23.55■■□□□ 1.36
SSPN-204ENST00000535504 S1PR5Q9H228 398 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 FBXL5Q9UKA1 691 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 MAFFQ9ULX9 164 aa23.55■■□□□ 1.36
SSPN-204ENST00000535504 TIMM13Q9Y5L4 95 aaPredicted RBP23.55■■□□□ 1.36
SSPN-204ENST00000535504 CCDC195A0A1B0GUA6 201 aa23.54■■□□□ 1.36
SSPN-204ENST00000535504 PRRG1O14668 218 aa23.54■■□□□ 1.36
SSPN-204ENST00000535504 PPEF2O14830 753 aa23.54■■□□□ 1.36
SSPN-204ENST00000535504 OAZ2O95190 189 aa23.54■■□□□ 1.36
SSPN-204ENST00000535504 HNRNPA1P09651 372 aaKnown RBP eCLIP23.54■■□□□ 1.36
SSPN-204ENST00000535504 EPB41P11171 864 aaKnown RBP23.54■■□□□ 1.36
SSPN-204ENST00000535504 PSMC2P35998 433 aaKnown RBP23.54■■□□□ 1.36
SSPN-204ENST00000535504 CLEC17AQ6ZS10 378 aa23.54■■□□□ 1.36
SSPN-204ENST00000535504 INTS8Q75QN2 995 aaKnown RBP23.54■■□□□ 1.36
SSPN-204ENST00000535504 SMYD4Q8IYR2 804 aaPredicted RBP23.54■■□□□ 1.36
SSPN-204ENST00000535504 SPATA20Q8TB22 786 aa23.54■■□□□ 1.36
SSPN-204ENST00000535504 ERCC4Q92889 916 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms