RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 BORCS6Q96GS4 357 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 ANKRD36BP1Q96IX9 119 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 SENP8Q96LD8 212 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 FNBP1Q96RU3 617 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 POP1Q99575 1024 aaKnown RBP24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 CLSTN2Q9H4D0 955 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 AGAP1Q9UPQ3 857 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 GRXCR2A6NFK2 248 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 GLUD1P00367 558 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 C1RP00736 705 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 HOXB8P17481 243 aaPredicted RBP24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 NR2F2P24468 414 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 TAF6P49848 677 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 EDRF1Q3B7T1 1238 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 CEP135Q66GS9 1140 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 PTCRAQ6ISU1 281 aaPredicted RBP24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 PALB2Q86YC2 1186 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 CSGALNACT2Q8N6G5 542 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 PARD3BQ8TEW8 1205 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 S1PR5Q9H228 398 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 DZANK1Q9NVP4 752 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 KIAA1468Q9P260 1216 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 VWA8A3KMH1 1905 aa24.53■■□□□ 1.52
SFSWAP-204ENST00000535399 BIN1O00499 593 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 MBTPS2O43462 519 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 TGM5O43548 720 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 TNNC2P02585 160 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 CD44P16070 742 aaKnown RBP24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 RPL13P26373 211 aaKnown RBP24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 RBP5P82980 135 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 SMAD4Q13485 552 aaKnown RBP24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 RAB33AQ14088 237 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 PUS10Q3MIT2 529 aaKnown RBP24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 LRRC52Q8N7C0 313 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 ZNF516Q92618 1163 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 ZNF560Q96MR9 790 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 FRMD4BQ9Y2L6 1034 aa24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 TIMM13Q9Y5L4 95 aaPredicted RBP24.52■■□□□ 1.52
SFSWAP-204ENST00000535399 MAPK13O15264 365 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 AKAP3O75969 853 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 OAZ2O95190 189 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 TNNI1P19237 187 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 TYMPP19971 482 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 OR1D2P34982 312 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 PNPLA4P41247 253 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 PMS1P54277 932 aaKnown RBP24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 CLDN10P78369 228 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 ADAM9Q13443 819 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 TRAPPC11Q7Z392 1133 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 C12orf76Q8N812 135 aaPredicted RBP24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 MAN1C1Q9NR34 630 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 CDY1Q9Y6F8 540 aa24.51■■□□□ 1.51
SFSWAP-204ENST00000535399 LRRIQ3A6PVS8 624 aaPredicted RBP24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 PPP1R3GB7ZBB8 358 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 H7C4K7 107 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 KRT19P08727 400 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 YWHAHQ04917 246 aaPredicted RBP24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 SV2CQ496J9 727 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 CTXN3Q4LDR2 81 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 ANKRD40Q6AI12 368 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 SLC8B1Q6J4K2 584 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 ZC3H3Q8IXZ2 948 aaKnown RBP24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 TMC2Q8TDI7 906 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 APOL5Q9BWW9 433 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 FBXL5Q9UKA1 691 aa24.5■■□□□ 1.51
SFSWAP-204ENST00000535399 KPNA7A9QM74 516 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 GOLGA6L22H0YM25 854 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 CYB561D2O14569 222 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 PSMA7O14818 248 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 CYP11A1P05108 521 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 SPATA31D3P0C874 917 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 ODC1P11926 461 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 IL9P15248 144 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 CCNE1P24864 410 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 PPP1R2P41236 205 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 DLG4P78352 724 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 STIM1Q13586 685 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 ZNF280DQ6N043 979 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 SPATA31D4Q6ZUB0 917 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 TRIML1Q8N9V2 468 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 GPT2Q8TD30 523 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 HDAC7Q8WUI4 952 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 SUSD6Q92537 303 aa24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 DHTKD1Q96HY7 919 aaPredicted RBP24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 USP15Q9Y4E8 981 aaPredicted RBP24.49■■□□□ 1.51
SFSWAP-204ENST00000535399 TRIM49BA6NDI0 452 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 VCANP13611 3396 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 PSMC2P35998 433 aaKnown RBP24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 LRRC63Q05C16 580 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 BFSP1Q12934 665 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 SMAD2Q15796 467 aaKnown RBP24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 C1orf220Q5T0J3 134 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 RARS2Q5T160 578 aaKnown RBP24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 USP37Q86T82 979 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 FAM186BQ8IYM0 893 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 KREMEN2Q8NCW0 462 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 FEZF2Q8TBJ5 459 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 EEF2KMTQ96G04 330 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 TSG101Q99816 390 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 ADAM7Q9H2U9 754 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms