RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MAGI3Q5TCQ9 1506 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 KDM1AO60341 852 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 GNASQ5JWF2 1037 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 CHSY1Q86X52 802 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 SLITRK1Q96PX8 696 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 SMG5Q9UPR3 1016 aaKnown RBP19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 GALCP54803 685 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 GOLGA7BQ2TAP0 167 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 CLEC10AQ8IUN9 316 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 LRRC71Q8N4P6 559 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 SPATA4Q8NEY3 305 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 MXRA8Q9BRK3 442 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 GPR63Q9BZJ6 419 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 C20orf96Q9NUD7 363 aaPredicted RBP19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 NAGPAQ9UK23 515 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 GMPSP49915 693 aaPredicted RBP19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 C10orf120Q5SQS8 335 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 PRAMEF18Q5VWM3 479 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 NOTUMQ6P988 496 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 SMIM5Q71RC9 77 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 WDR48Q8TAF3 677 aa19.03■□□□□ 0.64
SFSWAP-203ENST00000535236 RBM15Q96T37 977 aaKnown RBP eCLIP19.03■□□□□ 0.641e-7■■■■□ 22
SFSWAP-203ENST00000535236 HLA-DRAP01903 254 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 LRG1P02750 347 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 PRKCQQ04759 706 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 GRIN1Q05586 938 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 HS6ST3Q8IZP7 471 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 ZNF555Q8NEP9 628 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 JCADQ9P266 1359 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 ARHGEF9O43307 516 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 NPTXRO95502 500 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 SF3B3Q15393 1217 aaKnown RBP19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 CCDC144BQ3MJ40 725 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 EFHC1Q5JVL4 640 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 C16orf86Q6ZW13 317 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 MAFGO15525 162 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 CDH2P19022 906 aaPredicted RBP19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 CAPZA2P47755 286 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 DCAF6Q58WW2 860 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 CATSPER1Q8NEC5 780 aa19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 PAWRQ96IZ0 340 aaKnown RBP19.02■□□□□ 0.64
SFSWAP-203ENST00000535236 ITIH2P19823 946 aa19.02■□□□□ 0.63
SFSWAP-203ENST00000535236 ETFBP38117 255 aa19.02■□□□□ 0.63
SFSWAP-203ENST00000535236 STX3Q13277 289 aa19.02■□□□□ 0.63
SFSWAP-203ENST00000535236 RNF180Q86T96 592 aa19.02■□□□□ 0.63
SFSWAP-203ENST00000535236 METTL16Q86W50 562 aaKnown RBP19.02■□□□□ 0.63
SFSWAP-203ENST00000535236 MYOZ2Q9NPC6 264 aa19.02■□□□□ 0.63
SFSWAP-203ENST00000535236 AAASQ9NRG9 546 aa19.02■□□□□ 0.63
SFSWAP-203ENST00000535236 GIMAP4Q9NUV9 329 aa19.02■□□□□ 0.63
SFSWAP-203ENST00000535236 PDS5AQ29RF7 1337 aaKnown RBP19.02■□□□□ 0.63
SFSWAP-203ENST00000535236 MYL2P10916 166 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 GPD1P21695 349 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 PGM1P36871 562 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 ARHGAP18Q8N392 663 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 IPMKQ8NFU5 416 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 NRKQ7Z2Y5 1582 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 CELF2O95319 508 aaKnown RBP19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 ENO1P06733 434 aaKnown RBP19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 UCHL3P15374 230 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 BTN2A2Q8WVV5 523 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 ZNF556Q9HAH1 456 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 PRDM15P57071 1507 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 EXTL3O43909 919 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 KDSRQ06136 332 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 LAMC2Q13753 1193 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 C6orf203Q9P0P8 240 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 PAK5Q9P286 719 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 MRFAP1Q9Y605 127 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 ABCA8O94911 1581 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 KRT16P08779 473 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 ZNF200P98182 395 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 TDRD10Q5VZ19 366 aaKnown RBP19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 MRPL1Q9BYD6 325 aaKnown RBP19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 ADNPQ9H2P0 1102 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 NEU2Q9Y3R4 380 aa19.01■□□□□ 0.63
SFSWAP-203ENST00000535236 ANKRD65E5RJM6 399 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 SPRP35270 261 aaPredicted RBP19■□□□□ 0.63
SFSWAP-203ENST00000535236 FCGRTP55899 365 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 ZRANB3Q5FWF4 1079 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 OOSP2Q86WS3 158 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 ADSSL1Q8N142 457 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 UBA3Q8TBC4 463 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 IGSF9BQ9UPX0 1349 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 CFAP73A6NFT4 308 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 SEC24DO94855 1032 aaPredicted RBP19■□□□□ 0.63
SFSWAP-203ENST00000535236 AGTP01019 485 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 SPATA21Q7Z572 469 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 TMA16Q96EY4 203 aaKnown RBP19■□□□□ 0.63
SFSWAP-203ENST00000535236 TMEM8AQ9HCN3 771 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 PSMC3IPQ9P2W1 217 aaPredicted RBP19■□□□□ 0.63
SFSWAP-203ENST00000535236 TFRCP02786 760 aaKnown RBP19■□□□□ 0.63
SFSWAP-203ENST00000535236 PNPLA4P41247 253 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 HNRNPH2P55795 449 aaKnown RBP19■□□□□ 0.63
SFSWAP-203ENST00000535236 MDH1BQ5I0G3 518 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 TRAPPC11Q7Z392 1133 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 RUBCNQ92622 972 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 PLEKHA8Q96JA3 519 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 ZFP42Q96MM3 310 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 RIT2Q99578 217 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms