RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 KPNA7A9QM74 516 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 PER2O15055 1255 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 TRAPPC3O43617 180 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 PHACTR2O75167 634 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 LRRN2O75325 713 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 FGFR1OPO95684 399 aaKnown RBP14.14□□□□□ -0.15
TMEM258-202ENST00000535042 URODP06132 367 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 GTF2F1P35269 517 aaKnown RBP eCLIP14.14□□□□□ -0.15
TMEM258-202ENST00000535042 BIRC3Q13489 604 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 SMC1AQ14683 1233 aaKnown RBP14.14□□□□□ -0.15
TMEM258-202ENST00000535042 CBWD6Q4V339 395 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 DCAF17Q5H9S7 520 aaPredicted RBP14.14□□□□□ -0.15
TMEM258-202ENST00000535042 CBWD3Q5JTY5 395 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 CBWD5Q5RIA9 395 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 TCERG1LQ5VWI1 586 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 PDE12Q6L8Q7 609 aaKnown RBP14.14□□□□□ -0.15
TMEM258-202ENST00000535042 DSTYKQ6XUX3 929 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 USP37Q86T82 979 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 TRIM59Q8IWR1 403 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 MICALL1Q8N3F8 863 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 LNX1Q8TBB1 728 aaPredicted RBP14.14□□□□□ -0.15
TMEM258-202ENST00000535042 RIN2Q8WYP3 895 aaPredicted RBP14.14□□□□□ -0.15
TMEM258-202ENST00000535042 HPDLQ96IR7 371 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 CNOT6LQ96LI5 555 aaKnown RBP14.14□□□□□ -0.15
TMEM258-202ENST00000535042 TTPALQ9BTX7 342 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 XYLT2Q9H1B5 865 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 NSUN3Q9H649 340 aaKnown RBP14.14□□□□□ -0.15
TMEM258-202ENST00000535042 TMEM8AQ9HCN3 771 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 STK39Q9UEW8 545 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 PCDHB8Q9UN66 801 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 NFE2L3Q9Y4A8 694 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 IRAK3Q9Y616 596 aa14.14□□□□□ -0.15
TMEM258-202ENST00000535042 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 SYN3O14994 580 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 GNA14O95837 355 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 HLA-DRAP01903 254 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 CNPP09543 421 aaKnown RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 CCDC192P0DO97 292 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 RPL17P18621 184 aaKnown RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 GTF2H1P32780 548 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 CA8P35219 290 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 PNPLA4P41247 253 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 HYAL1Q12794 435 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 TRPC3Q13507 836 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 NCOA4Q13772 614 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 MRPL58Q14197 206 aaKnown RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 NCAPHQ15003 741 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 CCDC85BQ15834 202 aaPredicted RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 SV2CQ496J9 727 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 HSP90AA4PQ58FG1 418 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 VARS2Q5ST30 1063 aaKnown RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 KIAA1841Q6NSI8 718 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 RSPO2Q6UXX9 243 aaPredicted RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 RBM23Q86U06 439 aaKnown RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 TAS1R2Q8TE23 839 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 PIK3R5Q8WYR1 880 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 SEMA4DQ92854 862 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 ZNF560Q96MR9 790 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 KLHL5Q96PQ7 755 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 THAP9Q9H5L6 903 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 RXFP1Q9HBX9 757 aa14.13□□□□□ -0.15
TMEM258-202ENST00000535042 MRPL17Q9NRX2 175 aaKnown RBP14.13□□□□□ -0.15
TMEM258-202ENST00000535042 MYO9BQ13459 2157 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 CYB561D2O14569 222 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 TEX28O15482 410 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 ADAM12O43184 909 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 TBC1D4O60343 1298 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 CLASP2O75122 1294 aaKnown RBP14.12□□□□□ -0.15
TMEM258-202ENST00000535042 PAX3P23760 479 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 NRIP1P48552 1158 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 MXI1P50539 228 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 WSCD1Q658N2 575 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 KRT39Q6A163 491 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 CREBRFQ8IUR6 639 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 GPR65Q8IYL9 337 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 PPM1EQ8WY54 764 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 CLSTN3Q9BQT9 956 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 PI4K2AQ9BTU6 479 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 TLE6Q9H808 572 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.12□□□□□ -0.15
TMEM258-202ENST00000535042 FANCLQ9NW38 375 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 GDAP2Q9NXN4 497 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 STXBP5LQ9Y2K9 1186 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 SNX9Q9Y5X1 595 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 SZT2Q5T011 3432 aa14.12□□□□□ -0.15
TMEM258-202ENST00000535042 STX10O60499 249 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 STAU1O95793 577 aaKnown RBP14.11□□□□□ -0.15
TMEM258-202ENST00000535042 CYP11A1P05108 521 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 TYMPP19971 482 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 ATICP31939 592 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 SCN1AP35498 2009 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 FMO5P49326 533 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 RBM10P98175 930 aaKnown RBP14.11□□□□□ -0.15
TMEM258-202ENST00000535042 MYL5Q02045 173 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 KCNH2Q12809 1159 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 MYO1EQ12965 1108 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 BMS1Q14692 1282 aaKnown RBP14.11□□□□□ -0.15
TMEM258-202ENST00000535042 PSMD5Q16401 504 aa14.11□□□□□ -0.15
TMEM258-202ENST00000535042 DUSP6Q16828 381 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms