RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 KRT36O76013 467 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 TAC1P20366 129 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 ANXA13P27216 316 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 STX2P32856 288 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 TTLL12Q14166 644 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-210ENST00000534405 TMEM259Q4ZIN3 620 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 RFWD3Q6PCD5 774 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 HS2ST1Q7LGA3 356 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 NT5DC3Q86UY8 548 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 FAM178BQ8IXR5 827 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 SMC6Q96SB8 1091 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 DMAC2Q9NW81 257 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 SNX24Q9Y343 169 aa20.31■□□□□ 0.84
SMPD1-210ENST00000534405 IGSF9BQ9UPX0 1349 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 BTBD19C9JJ37 291 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 HNRNPCL1O60812 293 aaKnown RBP20.3■□□□□ 0.84
SMPD1-210ENST00000534405 PSMG1O95456 288 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 GH1P01241 217 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 CCDC92Q53HC0 331 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-210ENST00000534405 ODR4Q5SWX8 454 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 VPS36Q86VN1 386 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 HES6Q96HZ4 224 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 SERPINB12Q96P63 405 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 SYT11Q9BT88 431 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 OXCT2Q9BYC2 517 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-210ENST00000534405 BRD8Q9H0E9 1235 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 FBXO28Q9NVF7 368 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 HERC5Q9UII4 1024 aaKnown RBP20.3■□□□□ 0.84
SMPD1-210ENST00000534405 NR2E1Q9Y466 385 aa20.3■□□□□ 0.84
SMPD1-210ENST00000534405 COL2A1P02458 1487 aaPredicted RBP20.3■□□□□ 0.84
SMPD1-210ENST00000534405 A0A0A6YYK5 440 aaPredicted RBP20.29■□□□□ 0.84
SMPD1-210ENST00000534405 FGGP02679 453 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 RARGP13631 454 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 MPP2Q14168 576 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 KBTBD12Q3ZCT8 623 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 DAW1Q8N136 415 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 RSPH1Q8WYR4 309 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 ZNF577Q9BSK1 485 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 MKNK1Q9BUB5 465 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 STK33Q9BYT3 514 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 METTL5Q9NRN9 209 aaKnown RBP20.29■□□□□ 0.84
SMPD1-210ENST00000534405 MTRF1LQ9UGC7 380 aaKnown RBP20.29■□□□□ 0.84
SMPD1-210ENST00000534405 ZBTB21Q9ULJ3 1066 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 SYNPO2Q9UMS6 1093 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 ATP8B3O60423 1300 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 APBA3O96018 575 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 FGFR4P22455 802 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 CD97P48960 835 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 ACSBG2Q5FVE4 666 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 ZNF449Q6P9G9 518 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 B3GNT9Q6UX72 402 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 OTUD6AQ7L8S5 288 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 JAMLQ86YT9 394 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 RUNDC3BQ96NL0 473 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 LXNQ9BS40 222 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 KCNK9Q9NPC2 374 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.29■□□□□ 0.84
SMPD1-210ENST00000534405 UMODL1Q5DID0 1318 aa20.29■□□□□ 0.84
SMPD1-210ENST00000534405 MAPK7Q13164 816 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 MOGSQ13724 837 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 DSTYKQ6XUX3 929 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 FAM47EQ6ZV65 393 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 CCDC80Q76M96 950 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 PALB2Q86YC2 1186 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 ST13P4Q8IZP2 240 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-210ENST00000534405 RDH13Q8NBN7 331 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 HAUS1Q96CS2 278 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 NACC1Q96RE7 527 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 GLIS2Q9BZE0 524 aaPredicted RBP20.28■□□□□ 0.84
SMPD1-210ENST00000534405 PARP2Q9UGN5 583 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 BCS1LQ9Y276 419 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 CBX6O95503 412 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 RINLQ6ZS11 566 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 ARHGEF18Q6ZSZ5 1173 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 SYCE1Q8N0S2 351 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 MPP4Q96JB8 637 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 MIPEPQ99797 713 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 INTS2Q9H0H0 1204 aaKnown RBP20.28■□□□□ 0.84
SMPD1-210ENST00000534405 SYNCQ9H7C4 482 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 TAS2R14Q9NYV8 317 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 SEL1LQ9UBV2 794 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 RASAL2Q9UJF2 1139 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 TMEM98Q9Y2Y6 226 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 MYH11P35749 1972 aa20.28■□□□□ 0.84
SMPD1-210ENST00000534405 SPDYE2BA6NHP3 402 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 A6NJR5 290 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 DDX39AO00148 427 aaKnown RBP20.27■□□□□ 0.84
SMPD1-210ENST00000534405 PLSCR1O15162 318 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 SUPT3HO75486 399 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 SPDYE6P0CI01 402 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 ABCB4P21439 1286 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 OXCT1P55809 520 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 STRN3Q13033 797 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 R3HDM1Q15032 1099 aaKnown RBP20.27■□□□□ 0.84
SMPD1-210ENST00000534405 OLFML2BQ68BL8 750 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 RIBC1Q8N443 379 aaPredicted RBP20.27■□□□□ 0.84
SMPD1-210ENST00000534405 SLC35G2Q8TBE7 412 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 STRA6Q9BX79 667 aa20.27■□□□□ 0.84
SMPD1-210ENST00000534405 DIS3Q9Y2L1 958 aaKnown RBP20.27■□□□□ 0.84
SMPD1-210ENST00000534405 SMIM31A0A1B0GVY4 71 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms