RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 VWA3BQ502W6 1294 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 TIGD5Q53EQ6 642 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 VPS52Q8N1B4 723 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 FBXL13Q8NEE6 735 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 POF1BQ8WVV4 589 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 MMS19Q96T76 1030 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 GPR62Q9BZJ7 368 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 PRDM12Q9H4Q4 367 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 ENTPD7Q9NQZ7 604 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 TIMM13Q9Y5L4 95 aaPredicted RBP18.78■□□□□ 0.6
NXF1-216ENST00000533499 SNX9Q9Y5X1 595 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 PLXNA4Q9HCM2 1894 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 KPNA7A9QM74 516 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 H3BNC9 293 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 CYB561D2O14569 222 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 SERPINC1P01008 464 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 COPB1P53618 953 aaKnown RBP18.77■□□□□ 0.6
NXF1-216ENST00000533499 TNNC1P63316 161 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 PLCB3Q01970 1234 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 ELAVL2Q12926 359 aaKnown RBP18.77■□□□□ 0.6
NXF1-216ENST00000533499 SGSM1Q2NKQ1 1148 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 WDR72Q3MJ13 1102 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 WDR44Q5JSH3 913 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 CD300LGQ6UXG3 332 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 SCARA5Q6ZMJ2 495 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 TAS1R1Q7RTX1 841 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 TMC7Q7Z402 723 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 DDX53Q86TM3 631 aaKnown RBP18.77■□□□□ 0.6
NXF1-216ENST00000533499 LRRC52Q8N7C0 313 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 SPPL3Q8TCT6 385 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 AUTS2Q8WXX7 1259 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 SENP8Q96LD8 212 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 CRACR2AQ9BSW2 395 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 TTYH1Q9H313 450 aaPredicted RBP18.77■□□□□ 0.6
NXF1-216ENST00000533499 NDST4Q9H3R1 872 aa18.77■□□□□ 0.6
NXF1-216ENST00000533499 C5orf67F2Z3F1 127 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 TMEM189-UBE2V1I3L0A0 370 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 LPXNO60711 386 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 HUS1O60921 280 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 URODP06132 367 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 ZNF18P17022 549 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 TKTP29401 623 aaKnown RBP18.76■□□□□ 0.59
NXF1-216ENST00000533499 PLCB2Q00722 1185 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 BMS1Q14692 1282 aaKnown RBP18.76■□□□□ 0.59
NXF1-216ENST00000533499 GRIN2CQ14957 1233 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 USP41Q3LFD5 358 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 ZNF667Q5HYK9 610 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 PLPP4Q5VZY2 271 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 SPOPLQ6IQ16 392 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 C15orf39Q6ZRI6 1047 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 SEMA4DQ92854 862 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 PCMTD1Q96MG8 357 aaPredicted RBP18.76■□□□□ 0.59
NXF1-216ENST00000533499 VN1R3Q9BXE9 311 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 HSD3B7Q9H2F3 369 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 RAB20Q9NX57 234 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 LIMA1Q9UHB6 759 aaKnown RBP18.76■□□□□ 0.59
NXF1-216ENST00000533499 POLIQ9UNA4 740 aa18.76■□□□□ 0.59
NXF1-216ENST00000533499 TMEM265A0A087WTH1 108 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 LRRN2O75325 713 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 SOD2P04179 222 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 ODC1P11926 461 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 DNAJB1P25685 340 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 ATICP31939 592 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 GLUD2P49448 558 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 FKBP15Q5T1M5 1219 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 GBP6Q6ZN66 633 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 Q7L0L9 218 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 METTL23Q86XA0 190 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 CXorf38Q8TB03 319 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 RIN2Q8WYP3 895 aaPredicted RBP18.75■□□□□ 0.59
NXF1-216ENST00000533499 SUSD3Q96L08 255 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 TCF25Q9BQ70 676 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 HERC2P3Q9BVR0 1158 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 TLR9Q9NR96 1032 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 GCNT4Q9P109 453 aa18.75■□□□□ 0.59
NXF1-216ENST00000533499 CXCL14O95715 111 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 P4HA1P13674 534 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 IGFBP4P22692 258 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 ERVFC1P60507 584 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 NOP14P78316 857 aaKnown RBP18.74■□□□□ 0.59
NXF1-216ENST00000533499 UBE3AQ05086 875 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 FILIP1LQ4L180 1135 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 MIIPQ5JXC2 388 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 PRSS55Q6UWB4 352 aaPredicted RBP18.74■□□□□ 0.59
NXF1-216ENST00000533499 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
NXF1-216ENST00000533499 APPL2Q8NEU8 664 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 TTPALQ9BTX7 342 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 INTS2Q9H0H0 1204 aaKnown RBP18.74■□□□□ 0.59
NXF1-216ENST00000533499 RBSNQ9H1K0 784 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 PCDHB8Q9UN66 801 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 PCDHGC5Q9Y5F6 944 aa18.74■□□□□ 0.59
NXF1-216ENST00000533499 LAMA2P24043 3122 aaKnown RBP18.74■□□□□ 0.59
NXF1-216ENST00000533499 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.73■□□□□ 0.59
NXF1-216ENST00000533499 ARHGEF37A1IGU5 675 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 P4HA2O15460 535 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 ASS1P00966 412 aaKnown RBP18.73■□□□□ 0.59
NXF1-216ENST00000533499 MCCD1P59942 119 aaPredicted RBP18.73■□□□□ 0.59
NXF1-216ENST00000533499 UBXN1Q04323 297 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 PTPROQ16827 1216 aa18.73■□□□□ 0.59
NXF1-216ENST00000533499 RTP2Q5QGT7 225 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms