RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 INPP5DQ92835 1189 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 TMEM237Q96Q45 408 aa17.62■□□□□ 0.41
CTSB-228ENST00000533455 MRPL47Q9HD33 250 aaKnown RBP17.62■□□□□ 0.41
CTSB-228ENST00000533455 SMG5Q9UPR3 1016 aaKnown RBP17.62■□□□□ 0.41
CTSB-228ENST00000533455 WDR64B1ANS9 1081 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 TCP10L2B9ZVM9 353 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 LIN7AO14910 233 aaPredicted RBP17.61■□□□□ 0.41
CTSB-228ENST00000533455 CLDN10P78369 228 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 RASA2Q15283 850 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 PDK4Q16654 411 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 DAB2IPQ5VWQ8 1189 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 PLEKHA7Q6IQ23 1121 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 CYP4F22Q6NT55 531 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 PHLDB2Q86SQ0 1253 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 PHF13Q86YI8 300 aaPredicted RBP17.61■□□□□ 0.41
CTSB-228ENST00000533455 ZNF622Q969S3 477 aaKnown RBP eCLIP17.61■□□□□ 0.41
CTSB-228ENST00000533455 PPCSQ9HAB8 311 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 KIAA1586Q9HCI6 787 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 SAYSD1Q9NPB0 183 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 PHTF1Q9UMS5 762 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 CHKBQ9Y259 395 aa17.61■□□□□ 0.41
CTSB-228ENST00000533455 LIASO43766 372 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 NOMO3P69849 1222 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 KRT76Q01546 638 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 ADCY1Q08828 1119 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 MAMLD1Q13495 774 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 PPP1R2P3Q6NXS1 205 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
CTSB-228ENST00000533455 SYTL5Q8TDW5 730 aaPredicted RBP17.6■□□□□ 0.41
CTSB-228ENST00000533455 FAM118BQ9BPY3 351 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 TRABDQ9H4I3 376 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 MAP3K20Q9NYL2 800 aaKnown RBP17.6■□□□□ 0.41
CTSB-228ENST00000533455 SCINQ9Y6U3 715 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 EDF1O60869 148 aaKnown RBP17.6■□□□□ 0.41
CTSB-228ENST00000533455 DCTN3O75935 186 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 CCNE2O96020 404 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 CETN2P41208 172 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 ANKRD20A2Q5SQ80 823 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 ANKRD20A1Q5TYW2 823 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 ANKRD20A3Q5VUR7 823 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 GSTA5Q7RTV2 222 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 KIRREL3Q8IZU9 778 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 RDM1Q8NG50 284 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 ZNF516Q92618 1163 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 ERP27Q96DN0 273 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 C11orf70Q9BRQ4 267 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 TRIM6Q9C030 488 aaPredicted RBP17.6■□□□□ 0.41
CTSB-228ENST00000533455 CNTNAP1P78357 1384 aa17.6■□□□□ 0.41
CTSB-228ENST00000533455 SPDYE2BA6NHP3 402 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 TBC1D12O60347 775 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 SPAG7O75391 227 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 SPDYE6P0CI01 402 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 CD58P19256 250 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 ACO1P21399 889 aaKnown RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 PAX7P23759 505 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 DSG3P32926 999 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 DNAJC3Q13217 504 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 C2CD6Q53TS8 623 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 EAPPQ56P03 285 aaPredicted RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 BRDTQ58F21 947 aaPredicted RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 ANO5Q75V66 913 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 VSIG1Q86XK7 387 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 E7ENQ6 273 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 HMGB2P26583 209 aaKnown RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 NFX1Q12986 1120 aaKnown RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 PSMD6Q15008 389 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 PGM5Q15124 567 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 ZACNQ401N2 412 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 WDR44Q5JSH3 913 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 STYK1Q6J9G0 422 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 RCOR2Q8IZ40 523 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 ABRAQ8N0Z2 381 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 ALLCQ8N6M5 410 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 C10orf82Q8WW14 230 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 RBM41Q96IZ5 413 aaKnown RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 LRRC37BQ96QE4 947 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 SMC6Q96SB8 1091 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 PAIP2Q9BPZ3 127 aaKnown RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 FAM213AQ9BRX8 229 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 GLIS2Q9BZE0 524 aaPredicted RBP17.59■□□□□ 0.41
CTSB-228ENST00000533455 SLC24A2Q9UI40 661 aa17.59■□□□□ 0.41
CTSB-228ENST00000533455 NDC80O14777 642 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 HGSO14964 777 aaPredicted RBP17.58■□□□□ 0.4
CTSB-228ENST00000533455 HNRNPDLO14979 420 aaKnown RBP17.58■□□□□ 0.4
CTSB-228ENST00000533455 ATP9AO75110 1047 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 HLA-DRAP01903 254 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 GNAZP19086 355 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 ALDH3A1P30838 453 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 RTP1P59025 263 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 MCL1Q07820 350 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 MORF4L2Q15014 288 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 PKN2Q16513 984 aaKnown RBP17.58■□□□□ 0.4
CTSB-228ENST00000533455 KRT27Q7Z3Y8 459 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 FHDC1Q9C0D6 1143 aaPredicted RBP17.58■□□□□ 0.4
CTSB-228ENST00000533455 RNPEPL1Q9HAU8 725 aa17.58■□□□□ 0.4
CTSB-228ENST00000533455 SSU72Q9NP77 194 aaKnown RBP17.58■□□□□ 0.4
CTSB-228ENST00000533455 ZNF70Q9UC06 446 aaPredicted RBP17.58■□□□□ 0.4
CTSB-228ENST00000533455 GRID1Q9ULK0 1009 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms