RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 GALR2O43603 387 aaPredicted RBP25.42■■□□□ 1.66
SMPD1-209ENST00000533196 RHOP08100 348 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 IDEP14735 1019 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 CPB1P15086 417 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 LILRA4P59901 499 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 SIX5Q8N196 739 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 RTP3Q9BQQ7 232 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 PANK2Q9BZ23 570 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 PANK4Q9NVE7 773 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 HCFC1R1Q9NWW0 138 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 GDE1Q9NZC3 331 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 MRPS23Q9Y3D9 190 aaKnown RBP25.42■■□□□ 1.66
SMPD1-209ENST00000533196 TISP43B9A030 160 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 CUTAO60888 179 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 MICAL2O94851 1124 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 IL18RAPO95256 599 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 GCNT3O95395 438 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 LDHAP00338 332 aaKnown RBP25.41■■□□□ 1.66
SMPD1-209ENST00000533196 NFICP08651 508 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 NPR3P17342 541 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 AOC1P19801 751 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 ADSSP30520 456 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 C9orf57Q5W0N0 161 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 CWF19L1Q69YN2 538 aaKnown RBP25.41■■□□□ 1.66
SMPD1-209ENST00000533196 NPAS3Q8IXF0 933 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 CCDC65Q8IXS2 484 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 ELMOD1Q8N336 334 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 ITFG1Q8TB96 612 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 TMEM206Q9H813 350 aa25.41■■□□□ 1.66
SMPD1-209ENST00000533196 ANO9A1A5B4 782 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 SEC24AO95486 1093 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 CFHP08603 1231 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 ODC1P11926 461 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 GARTP22102 1010 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 GUCY2FP51841 1108 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 ADCY1Q08828 1119 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 MYBPC2Q14324 1141 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 ATL3Q6DD88 541 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 OVOS1Q6IE37 1185 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 CRELD2Q6UXH1 353 aaPredicted RBP25.4■■□□□ 1.66
SMPD1-209ENST00000533196 PDILTQ8N807 584 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 LEMD2Q8NC56 503 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 FLCNQ8NFG4 579 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 FGF14Q92915 247 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 KBTBD4Q9NVX7 518 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 TBC1D7Q9P0N9 293 aa25.4■■□□□ 1.66
SMPD1-209ENST00000533196 TFIP11Q9UBB9 837 aaKnown RBP25.4■■□□□ 1.66
SMPD1-209ENST00000533196 TCHHQ07283 1943 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 ZNF197O14709 1029 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 ZSCAN22P10073 491 aaPredicted RBP25.39■■□□□ 1.66
SMPD1-209ENST00000533196 AMPD3Q01432 767 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 GPR17Q13304 367 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 IQCEQ6IPM2 695 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 PARM1Q6UWI2 310 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 STXBP4Q6ZWJ1 553 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 TMEM130Q8N3G9 435 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 SENP8Q96LD8 212 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 DSEQ9UL01 958 aa25.39■■□□□ 1.66
SMPD1-209ENST00000533196 TIMM13Q9Y5L4 95 aaPredicted RBP25.39■■□□□ 1.66
SMPD1-209ENST00000533196 PPEF2O14830 753 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 F13A1P00488 732 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 CYP11A1P05108 521 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 KCNA1Q09470 495 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 PLD1Q13393 1074 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 E2F4Q16254 413 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 RNF19BQ6ZMZ0 732 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 ALYREFQ86V81 257 aaKnown RBP25.38■■□□□ 1.65
SMPD1-209ENST00000533196 SYCP3Q8IZU3 236 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 IQUBQ8NA54 791 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 KCNG4Q8TDN1 519 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 GPR152Q8TDT2 470 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 ZNF512Q96ME7 567 aaPredicted RBP25.38■■□□□ 1.65
SMPD1-209ENST00000533196 DPP3Q9NY33 737 aa25.38■■□□□ 1.65
SMPD1-209ENST00000533196 TSC2P49815 1807 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 KIAA0391O15091 583 aaKnown RBP25.37■■□□□ 1.65
SMPD1-209ENST00000533196 TAF6P49848 677 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 MRE11P49959 708 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 CASP5P51878 434 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 SLC5A9Q2M3M2 681 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 PRSS36Q5K4E3 855 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 CYP4A22Q5TCH4 519 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 PHLDB3Q6NSJ2 640 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 CNNM4Q6P4Q7 775 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 BRSK2Q8IWQ3 736 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 CORO1BQ9BR76 489 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 MAGEF1Q9HAY2 307 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 HSFX1Q9UBD0 423 aa25.37■■□□□ 1.65
SMPD1-209ENST00000533196 KRBA1A5PL33 1030 aa25.36■■□□□ 1.65
SMPD1-209ENST00000533196 ECI2O75521 394 aa25.36■■□□□ 1.65
SMPD1-209ENST00000533196 TWF1Q12792 350 aa25.36■■□□□ 1.65
SMPD1-209ENST00000533196 PDZD4Q76G19 769 aaPredicted RBP25.36■■□□□ 1.65
SMPD1-209ENST00000533196 RPP25Q9BUL9 199 aaKnown RBP25.36■■□□□ 1.65
SMPD1-209ENST00000533196 IKZF4Q9H2S9 585 aa25.36■■□□□ 1.65
SMPD1-209ENST00000533196 ARHGEF3Q9NR81 526 aa25.36■■□□□ 1.65
SMPD1-209ENST00000533196 CA14Q9ULX7 337 aa25.36■■□□□ 1.65
SMPD1-209ENST00000533196 SPTLC1O15269 473 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 RFX1P22670 979 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 PNPLA4P41247 253 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 EPHA5P54756 1037 aa25.35■■□□□ 1.65
SMPD1-209ENST00000533196 PFKPQ01813 784 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms