RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 EFCAB13Q8IY85 973 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 CEP57L1Q8IYX8 460 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 PCIF1Q9H4Z3 704 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 DPP3Q9NY33 737 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 EPS15L1Q9UBC2 864 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 ATP6V1DQ9Y5K8 247 aa32.8■■■□□ 2.84
SSSCA1-207ENST00000533115 EIF3DO15371 548 aaKnown RBP eCLIP32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 EXTL3O43909 919 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 FSHRP23945 695 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 AFMP43652 599 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 BECN1Q14457 450 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 ARMCX5Q6P1M9 558 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 GET4Q7L5D6 327 aaPredicted RBP32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 EPM2AIP1Q7L775 607 aaPredicted RBP32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 USP37Q86T82 979 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 ASIC4Q96FT7 647 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 MFSD14AQ96MC6 490 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 OXCT2Q9BYC2 517 aaPredicted RBP32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 KCNK12Q9HB15 430 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 SERTAD1Q9UHV2 236 aa32.79■■■□□ 2.84
SSSCA1-207ENST00000533115 GOLGA8IPA6NC78 632 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 GOLGA8JA6NMD2 632 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 SPTLC1O15269 473 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 SLFN14P0C7P3 912 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 TYMPP19971 482 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 CMA1P23946 247 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 NTHL1P78549 312 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 EHHADHQ08426 723 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 TCEAL8Q8IYN2 117 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 ZNF507Q8TCN5 953 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 PBXIP1Q96AQ6 731 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 SENP8Q96LD8 212 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 SMOC2Q9H3U7 446 aa32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 RBAKQ9NYW8 714 aaPredicted RBP32.78■■■□□ 2.84
SSSCA1-207ENST00000533115 DOCK6Q96HP0 2047 aa32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 PVALEFA0A1B0GWK0 134 aa32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 ARHGEF37A1IGU5 675 aa32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 PRRG1O14668 218 aa32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 KIAA0391O15091 583 aaKnown RBP32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 HOXD13P35453 343 aa32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 WNT7BP56706 349 aa32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 CUL4BQ13620 913 aa32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 CYP4F11Q9HBI6 524 aa32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 IGSF9Q9P2J2 1179 aa32.77■■■□□ 2.84
SSSCA1-207ENST00000533115 DOCK8Q8NF50 2099 aa32.76■■■□□ 2.84
SSSCA1-207ENST00000533115 A0A1B0GVL5 298 aa32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 ACTN4O43707 911 aaKnown RBP32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 ODC1P11926 461 aa32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 CPB1P15086 417 aa32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 PFKFB1P16118 471 aa32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 OVOS1Q6IE37 1185 aa32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 GRAMD1CQ8IYS0 662 aa32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 GPD1LQ8N335 351 aa32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 NOC3LQ8WTT2 800 aaKnown RBP32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 AFF4Q9UHB7 1163 aaKnown RBP32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 MAFFQ9ULX9 164 aa32.76■■■□□ 2.83
SSSCA1-207ENST00000533115 TULP1O00294 542 aaPredicted RBP32.75■■■□□ 2.83
SSSCA1-207ENST00000533115 SEC24AO95486 1093 aa32.75■■■□□ 2.83
SSSCA1-207ENST00000533115 LRG1P02750 347 aa32.75■■■□□ 2.83
SSSCA1-207ENST00000533115 LAMP2P13473 410 aa32.75■■■□□ 2.83
SSSCA1-207ENST00000533115 TDGQ13569 410 aa32.75■■■□□ 2.83
SSSCA1-207ENST00000533115 SCAND2PQ9GZW5 306 aaPredicted RBP32.75■■■□□ 2.83
SSSCA1-207ENST00000533115 HCFC1R1Q9NWW0 138 aa32.75■■■□□ 2.83
SSSCA1-207ENST00000533115 DNMT3BQ9UBC3 853 aaKnown RBP32.75■■■□□ 2.83
SSSCA1-207ENST00000533115 OR6C75A6NL08 312 aa32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 TAF6P49848 677 aa32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 TFAMQ00059 246 aaKnown RBP32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 ADCY1Q08828 1119 aa32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 CACTINQ8WUQ7 758 aaKnown RBP32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 PAGE5Q96GU1 130 aa32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 USP25Q9UHP3 1055 aa32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 HPSEQ9Y251 543 aa32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 ZFP37Q9Y6Q3 630 aaPredicted RBP32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 UBE4BO95155 1302 aa32.74■■■□□ 2.83
SSSCA1-207ENST00000533115 SCN1AP35498 2009 aa32.73■■■□□ 2.83
SSSCA1-207ENST00000533115 PABPC1LQ4VXU2 614 aaKnown RBP32.73■■■□□ 2.83
SSSCA1-207ENST00000533115 RNF19BQ6ZMZ0 732 aa32.73■■■□□ 2.83
SSSCA1-207ENST00000533115 SCFD1Q8WVM8 642 aa32.73■■■□□ 2.83
SSSCA1-207ENST00000533115 ARIH1Q9Y4X5 557 aaPredicted RBP32.73■■■□□ 2.83
SSSCA1-207ENST00000533115 INSL5Q9Y5Q6 135 aa32.73■■■□□ 2.83
SSSCA1-207ENST00000533115 CYP11A1P05108 521 aa32.72■■■□□ 2.83
SSSCA1-207ENST00000533115 RSAD2Q8WXG1 361 aa32.72■■■□□ 2.83
SSSCA1-207ENST00000533115 NXPE3Q969Y0 559 aa32.72■■■□□ 2.83
SSSCA1-207ENST00000533115 PDE11AQ9HCR9 933 aa32.72■■■□□ 2.83
SSSCA1-207ENST00000533115 SLC39A2Q9NP94 309 aa32.72■■■□□ 2.83
SSSCA1-207ENST00000533115 HSPBP1Q9NZL4 362 aa32.72■■■□□ 2.83
SSSCA1-207ENST00000533115 CDH7Q9ULB5 785 aa32.72■■■□□ 2.83
SSSCA1-207ENST00000533115 TGFB1I1O43294 461 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 OR4Q2P0C623 313 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 MYBPC2Q14324 1141 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 NELFCDQ8IXH7 590 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 FBXL6Q8N531 539 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 ITFG1Q8TB96 612 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 ZNF560Q96MR9 790 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 AGPAT3Q9NRZ7 376 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 DSEQ9UL01 958 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 DUSP12Q9UNI6 340 aa32.71■■■□□ 2.83
SSSCA1-207ENST00000533115 TCHHQ07283 1943 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms