RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PSMD2Q13200 908 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 CTXN3Q4LDR2 81 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 ZNF280DQ6N043 979 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 DSTYKQ6XUX3 929 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 KRBA2Q6ZNG9 492 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 CCDC149Q6ZUS6 474 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 SMG7Q92540 1137 aaKnown RBP16.63■□□□□ 0.25
CPSF1-210ENST00000532935 PRKD2Q9BZL6 878 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 FBXL5Q9UKA1 691 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 NOTCH4Q99466 2003 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 ZNF233A6NK53 670 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 C2CD4DB7Z1M9 353 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 SPTLC1O15269 473 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 C8AP07357 584 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 HNRNPA1P09651 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
CPSF1-210ENST00000532935 TFAMQ00059 246 aaKnown RBP16.62■□□□□ 0.25
CPSF1-210ENST00000532935 YWHAHQ04917 246 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-210ENST00000532935 STK4Q13043 487 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 KNOP1Q1ED39 458 aaKnown RBP16.62■□□□□ 0.25
CPSF1-210ENST00000532935 PPM1LQ5SGD2 360 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 HS2ST1Q7LGA3 356 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 CBWD2Q8IUF1 395 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 KIAA0895Q8NCT3 520 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 ZNF461Q8TAF7 563 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 SENP8Q96LD8 212 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 PIDD1Q9HB75 910 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 KIAA1586Q9HCI6 787 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 PDE11AQ9HCR9 933 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 MUTYHQ9UIF7 546 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 USTQ9Y2C2 406 aa16.62■□□□□ 0.25
CPSF1-210ENST00000532935 TIMM13Q9Y5L4 95 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-210ENST00000532935 WDR27A2RRH5 827 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 GOLGA6L4A6NEF3 574 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 CLIC2O15247 247 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 ABLIM3O94929 683 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 OAZ2O95190 189 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 RPN1P04843 607 aaKnown RBP16.61■□□□□ 0.25
CPSF1-210ENST00000532935 TYMPP19971 482 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 HOXA9P31269 272 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 TAF6P49848 677 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 ARPP19P56211 112 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 DPYDQ12882 1025 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 UVSSAQ2YD98 709 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 USP37Q86T82 979 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 TDRD5Q8NAT2 981 aaKnown RBP16.61■□□□□ 0.25
CPSF1-210ENST00000532935 SLC7A14Q8TBB6 771 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 CACTINQ8WUQ7 758 aaKnown RBP16.61■□□□□ 0.25
CPSF1-210ENST00000532935 C1QTNF1Q9BXJ1 281 aa16.61■□□□□ 0.25
CPSF1-210ENST00000532935 WDR6Q9NNW5 1121 aaKnown RBP16.61■□□□□ 0.25
CPSF1-210ENST00000532935 CGNQ9P2M7 1197 aaKnown RBP16.61■□□□□ 0.25
CPSF1-210ENST00000532935 CIZ1Q9ULV3 898 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-210ENST00000532935 ODC1P11926 461 aa16.6■□□□□ 0.25
CPSF1-210ENST00000532935 CYP2J2P51589 502 aa16.6■□□□□ 0.25
CPSF1-210ENST00000532935 SNRNP35Q16560 246 aaKnown RBP16.6■□□□□ 0.25
CPSF1-210ENST00000532935 RTL10Q7L3V2 364 aa16.6■□□□□ 0.25
CPSF1-210ENST00000532935 C12orf56Q8IXR9 622 aa16.6■□□□□ 0.25
CPSF1-210ENST00000532935 FMR1NBQ8N0W7 255 aaPredicted RBP16.6■□□□□ 0.25
CPSF1-210ENST00000532935 C1orf127Q8N9H9 656 aa16.6■□□□□ 0.25
CPSF1-210ENST00000532935 XXYLT1Q8NBI6 393 aa16.6■□□□□ 0.25
CPSF1-210ENST00000532935 CCDC47Q96A33 483 aaKnown RBP16.6■□□□□ 0.25
CPSF1-210ENST00000532935 FAM84AQ96KN4 292 aa16.6■□□□□ 0.25
CPSF1-210ENST00000532935 ZNF560Q96MR9 790 aa16.6■□□□□ 0.25
CPSF1-210ENST00000532935 CLUHO75153 1309 aa16.6■□□□□ 0.25
CPSF1-210ENST00000532935 ARHGEF37A1IGU5 675 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 CCL16O15467 120 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 RHOBTB3O94955 611 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 ITGB3P05106 788 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 TMEM191BP0C7N4 346 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 ATF2P15336 505 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 POLR2BP30876 1174 aaKnown RBP16.59■□□□□ 0.25
CPSF1-210ENST00000532935 PNPLA4P41247 253 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 SURF1Q15526 300 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 SV2CQ496J9 727 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 TPGS2Q68CL5 300 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 OVOS1Q6IE37 1185 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 OTOP3Q7RTS5 596 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 ZDHHC14Q8IZN3 488 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 PLCD3Q8N3E9 789 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 RDH13Q8NBN7 331 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 GOLGA5Q8TBA6 731 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 ACSF2Q96CM8 615 aaPredicted RBP16.59■□□□□ 0.25
CPSF1-210ENST00000532935 CCDC34Q96HJ3 373 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 OXCT2Q9BYC2 517 aaPredicted RBP16.59■□□□□ 0.25
CPSF1-210ENST00000532935 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 ITGA11Q9UKX5 1188 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 AGAP1Q9UPQ3 857 aa16.59■□□□□ 0.25
CPSF1-210ENST00000532935 OR6C75A6NL08 312 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 KPNA7A9QM74 516 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 CYB561D2O14569 222 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 XYLBO75191 536 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 CYP11A1P05108 521 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 POU2F2P09086 479 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 CPB1P15086 417 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 ELF1P32519 619 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 SNW1Q13573 536 aaKnown RBP16.58■□□□□ 0.24
CPSF1-210ENST00000532935 LMBRD2Q68DH5 695 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-210ENST00000532935 TCEAL8Q8IYN2 117 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 CSGALNACT2Q8N6G5 542 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 ENGASEQ8NFI3 743 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 CXorf38Q8TB03 319 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms