RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 PIK3R5Q8WYR1 880 aa26.77■■□□□ 1.88
USP48-214ENST00000532737 PPP2R3CQ969Q6 453 aa26.77■■□□□ 1.88
USP48-214ENST00000532737 KLHL5Q96PQ7 755 aa26.77■■□□□ 1.88
USP48-214ENST00000532737 RXFP1Q9HBX9 757 aa26.77■■□□□ 1.88
USP48-214ENST00000532737 RWDD2AQ9UIY3 292 aa26.77■■□□□ 1.88
USP48-214ENST00000532737 SSX2IPQ9Y2D8 614 aa26.77■■□□□ 1.88
USP48-214ENST00000532737 M0QZQ0 153 aa26.76■■□□□ 1.87
USP48-214ENST00000532737 KRT19P08727 400 aa26.76■■□□□ 1.87
USP48-214ENST00000532737 EPB41P11171 864 aaKnown RBP26.76■■□□□ 1.87
USP48-214ENST00000532737 KRT13P13646 458 aa26.76■■□□□ 1.87
USP48-214ENST00000532737 TAF6P49848 677 aa26.76■■□□□ 1.87
USP48-214ENST00000532737 MCCD1P59942 119 aaPredicted RBP26.76■■□□□ 1.87
USP48-214ENST00000532737 TFF2Q03403 129 aa26.76■■□□□ 1.87
USP48-214ENST00000532737 KLHL40Q2TBA0 621 aa26.76■■□□□ 1.87
USP48-214ENST00000532737 DSTYKQ6XUX3 929 aa26.76■■□□□ 1.87
USP48-214ENST00000532737 CEP63Q96MT8 703 aa26.76■■□□□ 1.87
USP48-214ENST00000532737 UHRF1Q96T88 793 aaPredicted RBP26.76■■□□□ 1.87
USP48-214ENST00000532737 PCDHB8Q9UN66 801 aa26.76■■□□□ 1.87
USP48-214ENST00000532737 SYN3O14994 580 aa26.75■■□□□ 1.87
USP48-214ENST00000532737 SLC16A3O15427 465 aaKnown RBP26.75■■□□□ 1.87
USP48-214ENST00000532737 CLASP2O75122 1294 aaKnown RBP26.75■■□□□ 1.87
USP48-214ENST00000532737 CST3P01034 146 aaPredicted RBP26.75■■□□□ 1.87
USP48-214ENST00000532737 C4BPAP04003 597 aaKnown RBP26.75■■□□□ 1.87
USP48-214ENST00000532737 TRIM49P0CI25 452 aa26.75■■□□□ 1.87
USP48-214ENST00000532737 TRIM49CP0CI26 452 aa26.75■■□□□ 1.87
USP48-214ENST00000532737 PTMSP20962 102 aa26.75■■□□□ 1.87
USP48-214ENST00000532737 PAX3P23760 479 aa26.75■■□□□ 1.87
USP48-214ENST00000532737 BFSP1Q12934 665 aa26.75■■□□□ 1.87
USP48-214ENST00000532737 SKIV2LQ15477 1246 aaKnown RBP26.75■■□□□ 1.87
USP48-214ENST00000532737 FILIP1Q7Z7B0 1213 aa26.75■■□□□ 1.87
USP48-214ENST00000532737 LRRC52Q8N7C0 313 aa26.75■■□□□ 1.87
USP48-214ENST00000532737 SENP8Q96LD8 212 aa26.75■■□□□ 1.87
USP48-214ENST00000532737 IKBKBO14920 756 aa26.74■■□□□ 1.87
USP48-214ENST00000532737 LINC01565O15544 149 aa26.74■■□□□ 1.87
USP48-214ENST00000532737 BMP1P13497 986 aa26.74■■□□□ 1.87
USP48-214ENST00000532737 RPL17P18621 184 aaKnown RBP26.74■■□□□ 1.87
USP48-214ENST00000532737 PNPLA4P41247 253 aa26.74■■□□□ 1.87
USP48-214ENST00000532737 AP3M2P53677 418 aa26.74■■□□□ 1.87
USP48-214ENST00000532737 ENPEPQ07075 957 aa26.74■■□□□ 1.87
USP48-214ENST00000532737 COL19A1Q14993 1142 aa26.74■■□□□ 1.87
USP48-214ENST00000532737 VARS2Q5ST30 1063 aaKnown RBP26.74■■□□□ 1.87
USP48-214ENST00000532737 TDRD10Q5VZ19 366 aaKnown RBP26.74■■□□□ 1.87
USP48-214ENST00000532737 ZNF560Q96MR9 790 aa26.74■■□□□ 1.87
USP48-214ENST00000532737 EMILIN2Q9BXX0 1053 aa26.74■■□□□ 1.87
USP48-214ENST00000532737 TIMM13Q9Y5L4 95 aaPredicted RBP26.74■■□□□ 1.87
USP48-214ENST00000532737 KPNA7A9QM74 516 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 TEX28O15482 410 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 RBM10P98175 930 aaKnown RBP26.73■■□□□ 1.87
USP48-214ENST00000532737 PPP3CAQ08209 521 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 PSMD5Q16401 504 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 SV2CQ496J9 727 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 SASS6Q6UVJ0 657 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 USP37Q86T82 979 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 EFHBQ8N7U6 833 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 VN1R2Q8NFZ6 395 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 CDCA3Q99618 268 aaPredicted RBP26.73■■□□□ 1.87
USP48-214ENST00000532737 SRRTQ9BXP5 876 aaKnown RBP26.73■■□□□ 1.87
USP48-214ENST00000532737 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.73■■□□□ 1.87
USP48-214ENST00000532737 FNIP2Q9P278 1114 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 SCN1AP35498 2009 aa26.73■■□□□ 1.87
USP48-214ENST00000532737 ERCC5P28715 1186 aaPredicted RBP26.72■■□□□ 1.87
USP48-214ENST00000532737 ADAM15Q13444 863 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 BIRC3Q13489 604 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 MRPL58Q14197 206 aaKnown RBP26.72■■□□□ 1.87
USP48-214ENST00000532737 CTC1Q2NKJ3 1217 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 ZACNQ401N2 412 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 PDXDC1Q6P996 788 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 RSPO2Q6UXX9 243 aaPredicted RBP26.72■■□□□ 1.87
USP48-214ENST00000532737 SV2AQ7L0J3 742 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 APPL2Q8NEU8 664 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 SYAP1Q96A49 352 aaPredicted RBP26.72■■□□□ 1.87
USP48-214ENST00000532737 HPDLQ96IR7 371 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 CLSTN3Q9BQT9 956 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 MTRRQ9UBK8 725 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 ARMCX3Q9UH62 379 aaPredicted RBP26.72■■□□□ 1.87
USP48-214ENST00000532737 DACH1Q9UI36 760 aa26.72■■□□□ 1.87
USP48-214ENST00000532737 R3HCC1Q9Y3T6 440 aaKnown RBP26.72■■□□□ 1.87
USP48-214ENST00000532737 VWA8A3KMH1 1905 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 CYB561D2O14569 222 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 ADAM12O43184 909 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 NCK2O43639 380 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 PHACTR2O75167 634 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 VNN1O95497 513 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 KLRC2P26717 231 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 GCLMP48507 274 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 KCNQ1P51787 676 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 KCNC3Q14003 757 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 C15orf39Q6ZRI6 1047 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 ANKS3Q6ZW76 656 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 SLC22A17Q8WUG5 538 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 PABPC5Q96DU9 382 aaKnown RBP26.71■■□□□ 1.87
USP48-214ENST00000532737 NECAB3Q96P71 396 aaPredicted RBP26.71■■□□□ 1.87
USP48-214ENST00000532737 CLDND1Q9NY35 253 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 BACE2Q9Y5Z0 518 aa26.71■■□□□ 1.87
USP48-214ENST00000532737 GLP2RO95838 553 aa26.7■■□□□ 1.86
USP48-214ENST00000532737 MYL6P60660 151 aa26.7■■□□□ 1.86
USP48-214ENST00000532737 CREMQ03060 361 aa26.7■■□□□ 1.86
USP48-214ENST00000532737 TRPC3Q13507 836 aa26.7■■□□□ 1.86
USP48-214ENST00000532737 LLGL2Q6P1M3 1020 aa26.7■■□□□ 1.86
USP48-214ENST00000532737 FRMD5Q7Z6J6 570 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms