RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 SPIRE2Q8WWL2 714 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 COL20A1Q9P218 1284 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 TTC7AQ9ULT0 858 aaPredicted RBP16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 TACC3Q9Y6A5 838 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 NFASCO94856 1347 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 RECQL4O94761 1208 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 INHBAP08476 426 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 HOXC6P09630 235 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 NUMBP49757 651 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 SCNN1GP51170 649 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 GALCP54803 685 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 DR1Q01658 176 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 TTC1Q99614 292 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 HIPK3Q9H422 1215 aa16.62■□□□□ 0.25
PPFIA1-222ENST00000532504 GOLGA8CPA6NN73 597 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 LACTBL1A8MY62 500 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 NFKBIAP25963 317 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 SV2AQ7L0J3 742 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 MYLK4Q86YV6 388 aaPredicted RBP16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 INPP4AQ96PE3 977 aaPredicted RBP16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 SOCS7O14512 581 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 MLH1P40692 756 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 SLC7A5Q01650 507 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 YWHAHQ04917 246 aaPredicted RBP16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 MAP7D1Q3KQU3 841 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 MDH1BQ5I0G3 518 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 OVOS1Q6IE37 1185 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 PLPPR4Q7Z2D5 763 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 DCLK2Q8N568 766 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 PPTC7Q8NI37 304 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 MMP3P08254 477 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 SLC12A3P55017 1021 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 ZNF449Q6P9G9 518 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 KIAA0895Q8NCT3 520 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 MCUQ8NE86 351 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 LPPQ93052 612 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 CYFIP2Q96F07 1278 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 CAPN2P17655 700 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 JAG1P78504 1218 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 ZNF235Q14590 738 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 HEATR6Q6AI08 1181 aaKnown RBP16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 RIN2Q8WYP3 895 aaPredicted RBP16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 FBXO32Q969P5 355 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 DDX27Q96GQ7 796 aaKnown RBP16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 ATP8A1Q9Y2Q0 1164 aa16.61■□□□□ 0.25
PPFIA1-222ENST00000532504 CYP3A7-CYP3A51PA0A087WV96 503 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 CYP3A7P24462 503 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 KCNA1Q09470 495 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 FUT2Q10981 343 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 SMAD1Q15797 465 aaKnown RBP16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 TRIM65Q6PJ69 517 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 WDR35Q9P2L0 1181 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 GOLGA8MH3BSY2 632 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 FOXN3O00409 490 aaPredicted RBP16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 JADE1Q6IE81 842 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 DDX43Q9NXZ2 648 aaKnown RBP16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 ANKRD63C9JTQ0 380 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 ACADSBP45954 432 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 RAD51Q06609 339 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 NR1I3Q14994 352 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 CHSY1Q86X52 802 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 ANKS4BQ8N8V4 417 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 FBF1Q8TES7 1133 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 SMC6Q96SB8 1091 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 TMEM117Q9H0C3 514 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 ST3GAL5Q9UNP4 418 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 ALS2Q96Q42 1657 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 C10orf71Q711Q0 1435 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 HARS2P49590 506 aaKnown RBP16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 MAP3K7CLP57077 242 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 ST8SIA6P61647 398 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 TAP1Q03518 808 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 ELAVL2Q12926 359 aaKnown RBP16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 CROCCP2Q86T23 111 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 MRPS31Q92665 395 aaKnown RBP16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 ASIC4Q96FT7 647 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 GPR20Q99678 358 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 DYRK4Q9NR20 520 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 KRT82Q9NSB4 513 aa16.6■□□□□ 0.25
PPFIA1-222ENST00000532504 MYL4P12829 197 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 SMPD1P17405 629 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 AXLP30530 894 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 GARSP41250 739 aaKnown RBP16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 TTC30BQ8N4P2 665 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 PLCD4Q9BRC7 762 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 KLC2Q9H0B6 622 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 MUC3BQ9H195 1237 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 ZNF214Q9UL59 606 aaPredicted RBP16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 ATRNL1Q5VV63 1379 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 IGKV6D-41A0A0C4DH26 115 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 I3L4J1 428 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 TTI2Q6NXR4 508 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 METTL5Q9NRN9 209 aaKnown RBP16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 DDX20Q9UHI6 824 aaKnown RBP16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 MAFO75444 373 aaPredicted RBP16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 GSTA1P08263 222 aa16.59■□□□□ 0.25
PPFIA1-222ENST00000532504 GSTA2P09210 222 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms