RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, human

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNL1-208	ENST00000532056	C1orf220	Q5T0J3	134 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	DSTYK	Q6XUX3	929 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	CEP57	Q86XR8	500 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	APPL2	Q8NEU8	664 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	LNX1	Q8TBB1	728 aa	Predicted RBP	10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	RIN2	Q8WYP3	895 aa	Predicted RBP	10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	KLHL5	Q96PQ7	755 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	MED15	Q96RN5	788 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	EMILIN2	Q9BXX0	1053 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	TLE6	Q9H808	572 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	METTL14	Q9HCE5	456 aa	Known RBP	10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	ANO10	Q9NW15	660 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	FNIP2	Q9P278	1114 aa		10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.84	□□□□□ -0.67
KNL1-208	ENST00000532056	MYO9B	Q13459	2157 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	ARHGEF37	A1IGU5	675 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	KPNA7	A9QM74	516 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	NCK2	O43639	380 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	STX10	O60499	249 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	FGFR1OP	O95684	399 aa	Known RBP	10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	STAU1	O95793	577 aa	Known RBP	10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	GNA14	O95837	355 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	C4BPA	P04003	597 aa	Known RBP	10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	CNP	P09543	421 aa	Known RBP	10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	TRIM49	P0CI25	452 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	TRIM49C	P0CI26	452 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	TYMP	P19971	482 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	GTF2H1	P32780	548 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	NDUFV1	P49821	464 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	MYO1E	Q12965	1108 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	BIRC3	Q13489	604 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	TRPC3	Q13507	836 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	COL19A1	Q14993	1142 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	ZACN	Q401N2	412 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	CCDC40	Q4G0X9	1142 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	VARS2	Q5ST30	1063 aa	Known RBP	10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	TDRD10	Q5VZ19	366 aa	Known RBP	10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	SCARA3	Q6AZY7	606 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	C15orf39	Q6ZRI6	1047 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	ANKS3	Q6ZW76	656 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	FRMD5	Q7Z6J6	570 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	RBM23	Q86U06	439 aa	Known RBP	10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	EFHB	Q8N7U6	833 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	PPM1E	Q8WY54	764 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	SENP8	Q96LD8	212 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	SRRT	Q9BXP5	876 aa	Known RBP	10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	MTRR	Q9UBK8	725 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	BACE2	Q9Y5Z0	518 aa		10.83	□□□□□ -0.68
KNL1-208	ENST00000532056	SCN1A	P35498	2009 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056		H7C4K7	107 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	CYB561D2	O14569	222 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	PER2	O15055	1255 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	TEX28	O15482	410 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	CLASP2	O75122	1294 aa	Known RBP	10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	PHACTR2	O75167	634 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	LETM1	O95202	739 aa	Predicted RBP	10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	C1R	P00736	705 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	CST3	P01034	146 aa	Predicted RBP	10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	CYP11A1	P05108	521 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	ADH1A	P07327	375 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	ATIC	P31939	592 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	GCLM	P48507	274 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	MARS	P56192	900 aa	Known RBP	10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	PPP3CA	Q08209	521 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	MRPL58	Q14197	206 aa	Known RBP	10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	ZNF280D	Q6N043	979 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	SV2A	Q7L0J3	742 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	PPFIBP1	Q86W92	1011 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	PABPC5	Q96DU9	382 aa	Known RBP	10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	HPDL	Q96IR7	371 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	IGFLR1	Q9H665	355 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	TMEM8A	Q9HCN3	771 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	GDAP2	Q9NXN4	497 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	DSE	Q9UL01	958 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	EYS	Q5T1H1	3165 aa		10.82	□□□□□ -0.68
KNL1-208	ENST00000532056	LINC01565	O15544	149 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	TBC1D4	O60343	1298 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	HUS1	O60921	280 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	OAZ2	O95190	189 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	VNN1	O95497	513 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	SRGAP2B	P0DMP2	458 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	CCDC192	P0DO97	292 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	RPL17	P18621	184 aa	Known RBP	10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	KLRC2	P26717	231 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	MXI1	P50539	228 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	CLCN4	P51793	760 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	MYL6	P60660	151 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	YWHAH	Q04917	246 aa	Predicted RBP	10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	TYRO3	Q06418	890 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	ADAM15	Q13444	863 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	NCOA4	Q13772	614 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	KCNC3	Q14003	757 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	SKIV2L	Q15477	1246 aa	Known RBP	10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	NFKBIB	Q15653	356 aa		10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	TPD52L1	Q16890	204 aa	Predicted RBP	10.81	□□□□□ -0.68
KNL1-208	ENST00000532056	CTC1	Q2NKJ3	1217 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms