RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 SCRN1Q12765 414 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 ESRP1Q6NXG1 681 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 KLHL24Q6TFL4 600 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 C16orf59Q7L2K0 433 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 GPR149Q86SP6 731 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 DIS3L2Q8IYB7 885 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 DDX54Q8TDD1 881 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 ZNF653Q96CK0 615 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 WDR18Q9BV38 432 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 THUMPD3Q9BV44 507 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 FUT8Q9BYC5 575 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 IPPKQ9H8X2 491 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 ZNF304Q9HCX3 659 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 MID1IP1Q9NPA3 183 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 MSRAQ9UJ68 235 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 ANAPC5Q9UJX4 755 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 SOX13Q9UN79 622 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 EEA1Q15075 1411 aa5.66□□□□□ -1.5
ECHDC1-222ENST00000531967 SGK1O00141 431 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 IKBKBO14920 756 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 ADAM20O43506 726 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 TK1P04183 234 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 ITGA2BP08514 1039 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 CD40P25942 277 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 SKIV2L2P42285 1042 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 HNMTP50135 292 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 STARD6P59095 220 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 TGFB2P61812 414 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 YWHAHQ04917 246 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 CBX3Q13185 183 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 GRIK5Q16478 980 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 ATG16L1Q676U5 607 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 TIGD7Q6NT04 549 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 ANGPTL8Q6UXH0 198 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 MEX3BQ6ZN04 569 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 DHX32Q7L7V1 743 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 KIAA2013Q8IYS2 634 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 FAM81BQ96LP2 452 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 LZTS2Q9BRK4 669 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 ZPBPQ9BS86 351 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 TTPALQ9BTX7 342 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 ANO3Q9BYT9 981 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 BRF2Q9HAW0 419 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 MKNK2Q9HBH9 465 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 STK32BQ9NY57 414 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 PTBP2Q9UKA9 531 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 CAMK2AQ9UQM7 478 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 TRAF3IP3Q9Y228 551 aa5.65□□□□□ -1.5
ECHDC1-222ENST00000531967 CLRN2A0PK11 232 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 SPATA31C2B4DYI2 1134 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 NDST3O95803 873 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 CLEC3BP05452 202 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 CD9P21926 228 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 GP5P40197 560 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 AMPD2Q01433 879 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 DSC2Q02487 901 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 DUSP4Q13115 394 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 ZBTB37Q5TC79 503 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 FDX2Q6P4F2 183 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 H1FNTQ75WM6 255 aaPredicted RBP5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 C12orf40Q86WS4 652 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 CXorf67Q86X51 503 aaPredicted RBP5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 GBP5Q96PP8 586 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 GDF15Q99988 308 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 KRT23Q9C075 422 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 SEMA6BQ9H3T3 888 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 DDX18Q9NVP1 670 aaKnown RBP5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 COL20A1Q9P218 1284 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 CAB39Q9Y376 341 aaPredicted RBP5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 JRKLQ9Y4A0 524 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 RUSC2Q8N2Y8 1516 aa5.65□□□□□ -1.51
ECHDC1-222ENST00000531967 SLC12A8A0AV02 714 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 CTAGE9A4FU28 777 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 LETM1O95202 739 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 ADCY5O95622 1261 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 OLFM2O95897 454 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 PDHBP11177 359 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 BUD31P41223 144 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 MANFP55145 182 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 SP140Q13342 867 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 KIZQ2M2Z5 673 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 ARHGAP15Q53QZ3 475 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 NOL9Q5SY16 702 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 SLC30A9Q6PML9 568 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 TAX1BP1Q86VP1 789 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 METTL23Q86XA0 190 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 SCML4Q8N228 414 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 LRRC43Q8N309 656 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 PANK1Q8TE04 598 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 KAT5Q92993 513 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 SLC35A4Q96G79 324 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 VPS50Q96JG6 964 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 RBM14Q96PK6 669 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 EIF2AQ9BY44 585 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 ACE2Q9BYF1 805 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 WNT10AQ9GZT5 417 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 USP44Q9H0E7 712 aa5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 TAF1DQ9H5J8 278 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-222ENST00000531967 TMEM8AQ9HCN3 771 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms