RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 MICALL1Q8N3F8 863 aa15.6■□□□□ 0.09
CPSF1-206ENST00000531480 LNX1Q8TBB1 728 aaPredicted RBP15.6■□□□□ 0.09
CPSF1-206ENST00000531480 SLC35C1Q96A29 364 aa15.6■□□□□ 0.09
CPSF1-206ENST00000531480 ZNF560Q96MR9 790 aa15.6■□□□□ 0.09
CPSF1-206ENST00000531480 CDCA3Q99618 268 aaPredicted RBP15.6■□□□□ 0.09
CPSF1-206ENST00000531480 PRDM6Q9NQX0 595 aa15.6■□□□□ 0.09
CPSF1-206ENST00000531480 ENTPD7Q9NQZ7 604 aa15.6■□□□□ 0.09
CPSF1-206ENST00000531480 ANO10Q9NW15 660 aa15.6■□□□□ 0.09
CPSF1-206ENST00000531480 PCDHB8Q9UN66 801 aa15.6■□□□□ 0.09
CPSF1-206ENST00000531480 PCDHGC5Q9Y5F6 944 aa15.6■□□□□ 0.09
CPSF1-206ENST00000531480 MTCL1Q9Y4B5 1905 aaKnown RBP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 PMM2O15305 246 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 VNN1O95497 513 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 FGFR1OPO95684 399 aaKnown RBP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 CXCL14O95715 111 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 CST3P01034 146 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 CYP11A1P05108 521 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 URODP06132 367 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 TYMPP19971 482 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 TYRO3Q06418 890 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 PPP3CAQ08209 521 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 BMS1Q14692 1282 aaKnown RBP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 CCDC85BQ15834 202 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 CTC1Q2NKJ3 1217 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 PLPP4Q5VZY2 271 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 PDXDC1Q6P996 788 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 SV2AQ7L0J3 742 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 ADGRD2Q7Z7M1 963 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 TRIM59Q8IWR1 403 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 ENOX1Q8TC92 643 aaKnown RBP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 SRRTQ9BXP5 876 aaKnown RBP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 XYLT2Q9H1B5 865 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 MRPL17Q9NRX2 175 aaKnown RBP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 ARMCX3Q9UH62 379 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-206ENST00000531480 AGAP1Q9UPQ3 857 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 NUB1Q9Y5A7 615 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 UNC80Q8N2C7 3258 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 BRWD1Q9NSI6 2320 aa15.59■□□□□ 0.09
CPSF1-206ENST00000531480 CUL9Q8IWT3 2517 aa15.58■□□□□ 0.09
CPSF1-206ENST00000531480 FSD2A1L4K1 749 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 KPNA7A9QM74 516 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 I3L4J1 428 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 OAZ2O95190 189 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 TRIM49P0CI25 452 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 TRIM49CP0CI26 452 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 TKTP29401 623 aaKnown RBP15.58■□□□□ 0.08
CPSF1-206ENST00000531480 ATICP31939 592 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 CREMQ03060 361 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 HYAL1Q12794 435 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 DUSP6Q16828 381 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 SV2CQ496J9 727 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 TCEAL5Q5H9L2 206 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 C11orf57Q6ZUT1 292 aaPredicted RBP15.58■□□□□ 0.08
CPSF1-206ENST00000531480 SPATA18Q8TC71 538 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 AUTS2Q8WXX7 1259 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 B3GALT6Q96L58 329 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 SENP8Q96LD8 212 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 THAP9Q9H5L6 903 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 TMEM8AQ9HCN3 771 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 MTRRQ9UBK8 725 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 COQ4Q9Y3A0 265 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 BACE2Q9Y5Z0 518 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 PLXNA3P51805 1871 aa15.58■□□□□ 0.08
CPSF1-206ENST00000531480 XIRP2A4UGR9 3374 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 SPTBN5Q9NRC6 3674 aaKnown RBP15.57■□□□□ 0.08
CPSF1-206ENST00000531480 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.57■□□□□ 0.08
CPSF1-206ENST00000531480 ARHGEF37A1IGU5 675 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 NCK2O43639 380 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 STX10O60499 249 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 CNPP09543 421 aaKnown RBP15.57■□□□□ 0.08
CPSF1-206ENST00000531480 KRT39Q6A163 491 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 SLC8B1Q6J4K2 584 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 TMEM184AQ6ZMB5 413 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 ANKS3Q6ZW76 656 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 DPH6Q7L8W6 267 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 EFHBQ8N7U6 833 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 APPL2Q8NEU8 664 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 MICAL1Q8TDZ2 1067 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 RIN2Q8WYP3 895 aaPredicted RBP15.57■□□□□ 0.08
CPSF1-206ENST00000531480 PPP2R3CQ969Q6 453 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 HPDLQ96IR7 371 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 KLHL5Q96PQ7 755 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 BPIFA3Q9BQP9 254 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 CLSTN3Q9BQT9 956 aa15.57■□□□□ 0.08
CPSF1-206ENST00000531480 TEX28O15482 410 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 CLASP2O75122 1294 aaKnown RBP15.56■□□□□ 0.08
CPSF1-206ENST00000531480 KRT19P08727 400 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 FAM163BP0C2L3 166 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 ODC1P11926 461 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 GCLMP48507 274 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 MYO1EQ12965 1108 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 NCOA4Q13772 614 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 PSMD5Q16401 504 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 VARS2Q5ST30 1063 aaKnown RBP15.56■□□□□ 0.08
CPSF1-206ENST00000531480 KIAA1841Q6NSI8 718 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 PRSS55Q6UWB4 352 aaPredicted RBP15.56■□□□□ 0.08
CPSF1-206ENST00000531480 TOP6BLQ8N6T0 577 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 SLC22A17Q8WUG5 538 aa15.56■□□□□ 0.08
CPSF1-206ENST00000531480 TAF4BQ92750 862 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms