RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 LRRC19Q9H756 370 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 PPM1HQ9ULR3 514 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.59□□□□□ -1.03
CSDE1-214ENST00000530886 ATP5BP06576 529 aaKnown RBP8.59□□□□□ -1.04
CSDE1-214ENST00000530886 CDK9P50750 372 aaKnown RBP8.59□□□□□ -1.04
CSDE1-214ENST00000530886 CALCOCO2Q13137 446 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 SNAPC2Q13487 334 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 NIPAL1Q6NVV3 410 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 CCDC62Q6P9F0 684 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 C16orf87Q6PH81 154 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 DCLRE1AQ6PJP8 1040 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 GIPC3Q8TF64 312 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF75CPQ92670 426 aaPredicted RBP8.59□□□□□ -1.04
CSDE1-214ENST00000530886 ZSCAN10Q96SZ4 725 aaPredicted RBP8.59□□□□□ -1.04
CSDE1-214ENST00000530886 PALMDQ9NP74 551 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 TYW1Q9NV66 732 aaKnown RBP8.59□□□□□ -1.04
CSDE1-214ENST00000530886 STK17AQ9UEE5 414 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 PCDHA6Q9UN73 950 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 FAF1Q9UNN5 650 aaPredicted RBP8.59□□□□□ -1.04
CSDE1-214ENST00000530886 COQ6Q9Y2Z9 468 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 PCDHA8Q9Y5H6 950 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 TAF1P21675 1872 aa8.59□□□□□ -1.04
CSDE1-214ENST00000530886 RASA4BC9J798 803 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 ANKRD63C9JTQ0 380 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 RASA4O43374 803 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 TYROBPO43914 113 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 SORBS3O60504 671 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 TNFAIP8O95379 198 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 ACSL3O95573 720 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 ESRRAP11474 423 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-214ENST00000530886 SCG2P13521 617 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 CETN2P41208 172 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 TMED10P49755 219 aaKnown RBP8.58□□□□□ -1.04
CSDE1-214ENST00000530886 NAA20P61599 178 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 TUBA4AP68366 448 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 DLG1Q12959 904 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 CLEC16AQ2KHT3 1053 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 MMEL1Q495T6 779 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 FBXL19Q6PCT2 694 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 TMEM126BQ8IUX1 230 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 MORC4Q8TE76 937 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 SPOCK2Q92563 424 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 EME1Q96AY2 570 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 NINJ2Q9NZG7 142 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 RAB26Q9ULW5 256 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 PCDHB2Q9Y5E7 798 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 SNX9Q9Y5X1 595 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.58□□□□□ -1.04
CSDE1-214ENST00000530886 CAPN14A8MX76 684 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 PIK3CDO00329 1044 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 VCPP55072 806 aaKnown RBP8.58□□□□□ -1.04
CSDE1-214ENST00000530886 EVX2Q03828 476 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 ORC2Q13416 577 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-214ENST00000530886 PDAP1Q13442 181 aaKnown RBP8.58□□□□□ -1.04
CSDE1-214ENST00000530886 SIX1Q15475 284 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-214ENST00000530886 ELMSAN1Q6PJG2 1045 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 LRRC49Q8IUZ0 686 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 GPIHBP1Q8IV16 184 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF276Q8N554 614 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF384Q8TF68 577 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 JADE3Q92613 823 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 HEPHQ9BQS7 1158 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 TANGO6Q9C0B7 1094 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 KLC2Q9H0B6 622 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 DKK3Q9UBP4 350 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 AJAP1Q9UKB5 411 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-214ENST00000530886 LZTS1Q9Y250 596 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 TRIM17Q9Y577 477 aa8.58□□□□□ -1.04
CSDE1-214ENST00000530886 TTLL13PA6NNM8 815 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 SPECC1L-ADORA2AF8WAN1 911 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 ZNF701M0R085 212 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-214ENST00000530886 NDUFB5O43674 189 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 MGEA5O60502 916 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 CAMTA2O94983 1202 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 PDE8BO95263 885 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 PGM3O95394 542 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 KRT13P13646 458 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 NUP107P57740 925 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 PSMC1P62191 440 aaKnown RBP8.57□□□□□ -1.04
CSDE1-214ENST00000530886 CDK18Q07002 472 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 NONOQ15233 471 aaKnown RBP eCLIP8.57□□□□□ -1.042e-6■■□□□ 12.7
CSDE1-214ENST00000530886 TBCCQ15814 346 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 POTEHQ6S545 545 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 TMC7Q7Z402 723 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 PALB2Q86YC2 1186 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 ULK2Q8IYT8 1036 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 TTC5Q8N0Z6 440 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 SLC35G2Q8TBE7 412 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 ALG3Q92685 438 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 PNMA5Q96PV4 448 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 RIOK1Q9BRS2 568 aaKnown RBP8.57□□□□□ -1.04
CSDE1-214ENST00000530886 MAK16Q9BXY0 300 aaKnown RBP8.57□□□□□ -1.04
CSDE1-214ENST00000530886 FOXP3Q9BZS1 431 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 DRC3Q9H069 523 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 CLK4Q9HAZ1 481 aaKnown RBP8.57□□□□□ -1.04
CSDE1-214ENST00000530886 KCNK13Q9HB14 408 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 TSC22D4Q9Y3Q8 395 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 NAV1Q8NEY1 1877 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 CFAP69A5D8W1 941 aa8.57□□□□□ -1.04
CSDE1-214ENST00000530886 IQCA1LA6NCM1 817 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms