RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 CLTAP09496 248 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 STAT6P42226 847 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 MAGEA9P43362 315 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 CREMQ03060 361 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 PRKCQQ04759 706 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 PKP1Q13835 747 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 UBXN2BQ14CS0 331 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 MLF2Q15773 248 aaPredicted RBP16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 SLC44A4Q53GD3 710 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 SLC39A4Q6P5W5 647 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 CCDC73Q6ZRK6 1079 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 SFR1Q86XK3 245 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 NETO1Q8TDF5 533 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 HDAC7Q8WUI4 952 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 DNAJC19Q96DA6 116 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 DDX27Q96GQ7 796 aaKnown RBP16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 IKZF4Q9H2S9 585 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 TBC1D7Q9P0N9 293 aa16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 ZFP37Q9Y6Q3 630 aaPredicted RBP16.3■□□□□ 0.2
AP002884.3-204ENST00000529938 TRIP11Q15643 1979 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 CNOT1A5YKK6 2376 aaKnown RBP16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 TISP43B9A030 160 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 ANKRD63C9JTQ0 380 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 F13A1P00488 732 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 PIGRP01833 764 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 FGFR3P22607 806 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 TKTP29401 623 aaKnown RBP16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 RSPO2Q6UXX9 243 aaPredicted RBP16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 ZNF720Q7Z2F6 126 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 MAP4K3Q8IVH8 894 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 FGF14Q92915 247 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 PLEKHA4Q9H4M7 779 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 TUBGCP4Q9UGJ1 667 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 PATJQ8NI35 1801 aa16.29■□□□□ 0.2
AP002884.3-204ENST00000529938 LACTBL1A8MY62 500 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 TRAPPC3O43617 180 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 PPP6R2O75170 966 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 SCP2P22307 547 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 OR1D2P34982 312 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 SPEM2Q0P670 501 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 TSSK4Q6SA08 328 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 PARM1Q6UWI2 310 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 CLDN23Q96B33 292 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 FAM212AQ96EL1 285 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 KIF12Q96FN5 646 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 MSTO1Q9BUK6 570 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 PRKD2Q9BZL6 878 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 LTB4R2Q9NPC1 389 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 ZDHHC7Q9NXF8 308 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 NUB1Q9Y5A7 615 aa16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.28■□□□□ 0.2
AP002884.3-204ENST00000529938 A0A0B4J269 797 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 TTC26A0AVF1 554 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 OGTO15294 1046 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 FAM189A1O60320 539 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 YEATS4O95619 227 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 C1RP00736 705 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 IDEP14735 1019 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 CD72P21854 359 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 RPL9P32969 192 aaKnown RBP16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 ENOX2Q16206 610 aaKnown RBP16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 PDXDC1Q6P996 788 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 FAM126AQ9BYI3 521 aaPredicted RBP16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 ST6GALNAC4Q9H4F1 302 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 MRPL44Q9H9J2 332 aaKnown RBP16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 RPF1Q9H9Y2 349 aaKnown RBP16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 PLEKHA5Q9HAU0 1116 aa16.27■□□□□ 0.2
AP002884.3-204ENST00000529938 COL4A3Q01955 1670 aa16.27■□□□□ 0.19
AP002884.3-204ENST00000529938 DOCK6Q96HP0 2047 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 ZMYND10O75800 440 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 PDIA4P13667 645 aaKnown RBP16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 FSHRP23945 695 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 ACOT2P49753 483 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 GUCY2FP51841 1108 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 DMWDQ09019 674 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 KCNA1Q09470 495 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 ZBTB6Q15916 424 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 SHC4Q6S5L8 630 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 NELL2Q99435 816 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 PRMT8Q9NR22 394 aaPredicted RBP16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 MTRRQ9UBK8 725 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 FBXW11Q9UKB1 542 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 CPSF3Q9UKF6 684 aaKnown RBP16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 ANGPTL2Q9UKU9 493 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 CDH7Q9ULB5 785 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 CDY1Q9Y6F8 540 aa16.26■□□□□ 0.19
AP002884.3-204ENST00000529938 MYH15Q9Y2K3 1946 aa16.25■□□□□ 0.19
AP002884.3-204ENST00000529938 MTCL1Q9Y4B5 1905 aaKnown RBP16.25■□□□□ 0.19
AP002884.3-204ENST00000529938 NCAM2O15394 837 aa16.25■□□□□ 0.19
AP002884.3-204ENST00000529938 CUTAO60888 179 aa16.25■□□□□ 0.19
AP002884.3-204ENST00000529938 PPP1R37O75864 691 aa16.25■□□□□ 0.19
AP002884.3-204ENST00000529938 GCNT3O95395 438 aa16.25■□□□□ 0.19
AP002884.3-204ENST00000529938 GAP43P17677 238 aa16.25■□□□□ 0.19
AP002884.3-204ENST00000529938 ABCD1P33897 745 aa16.25■□□□□ 0.19
AP002884.3-204ENST00000529938 MCM4P33991 863 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms