RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 LHX6Q9UPM6 363 aa6.79□□□□□ -1.32
CHRNA6-202ENST00000529467 SMG5Q9UPR3 1016 aaKnown RBP6.79□□□□□ -1.32
CHRNA6-202ENST00000529467 CACNA1BQ00975 2339 aa6.79□□□□□ -1.32
CHRNA6-202ENST00000529467 TICRRQ7Z2Z1 1910 aa6.79□□□□□ -1.32
CHRNA6-202ENST00000529467 TPRP12270 2363 aaKnown RBP6.79□□□□□ -1.32
CHRNA6-202ENST00000529467 COL4A2P08572 1712 aa6.79□□□□□ -1.32
CHRNA6-202ENST00000529467 DCDC2BA2VCK2 349 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 ARHGEF35A5YM69 484 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 H7C4K7 107 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 K7ERI5 159 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 ZNF197O14709 1029 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 SYN3O14994 580 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 MEFVO15553 781 aaPredicted RBP6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 JAK2O60674 1132 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 KRT37O76014 449 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 YEATS4O95619 227 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 BMP15O95972 392 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 CHRNB1P11230 501 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 KCNE1P15382 129 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 PSMC3P17980 439 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 GRM5P41594 1212 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 NRLP54845 237 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 LMNB2Q03252 620 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 RESTQ13127 1097 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 GRM2Q14416 872 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 ZNF174Q15697 407 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 RILPL1Q5EBL4 403 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 TPGS2Q68CL5 300 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 VITQ6UXI7 678 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 TAS1R3Q7RTX0 852 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 CELF5Q8N6W0 485 aaKnown RBP6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 ERMNQ8TAM6 284 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 FAM3CQ92520 227 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 IRF7Q92985 503 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 IFT74Q96LB3 600 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 ACO2Q99798 780 aaKnown RBP6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 TRMT61BQ9BVS5 477 aaKnown RBP6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 TMEM134Q9H6X4 195 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 CYP4F11Q9HBI6 524 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 CEP72Q9P209 647 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 FBXL5Q9UKA1 691 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 USP18Q9UMW8 372 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 NDRG2Q9UN36 371 aaKnown RBP6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 INSL5Q9Y5Q6 135 aa6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 PDCD11Q14690 1871 aaKnown RBP6.78□□□□□ -1.32
CHRNA6-202ENST00000529467 SPTBN2O15020 2390 aa6.77□□□□□ -1.32
CHRNA6-202ENST00000529467 SDK1Q7Z5N4 2213 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 ATG2BQ96BY7 2078 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 ARNTLO00327 626 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 PODXLO00592 558 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 ABLIM1O14639 778 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 PRRG1O14668 218 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 HRO43593 1189 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 PRPF40AO75400 957 aaKnown RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 OR52Z1P0C646 297 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 PROZP22891 400 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 GDI1P31150 447 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 RPL9P32969 192 aaKnown RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 VIPR2P41587 438 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 CXCL12P48061 93 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 TRAPPC10P48553 1259 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 NASPP49321 788 aaPredicted RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 FOSBP53539 338 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 YARSP54577 528 aaKnown RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 EPHA5P54756 1037 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 MLLT6P55198 1093 aaPredicted RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 ARPP19P56211 112 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 ZNF445P59923 1031 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 OSTNP61366 133 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 SPEM2Q0P670 501 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 ORC2Q13416 577 aaPredicted RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 GAS6Q14393 721 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 CYP4A22Q5TCH4 519 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 PDZD4Q76G19 769 aaPredicted RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 APBB1IPQ7Z5R6 666 aaPredicted RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 MFSD6LQ8IWD5 586 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 DAW1Q8N136 415 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 C4orf32Q8N8J7 132 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 DDX12PQ92771 950 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 KIFAP3Q92845 792 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 SMARCD2Q92925 531 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 SUSD3Q96L08 255 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 SPATA32Q96LK8 384 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 ZNF512Q96ME7 567 aaPredicted RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 ACAP3Q96P50 834 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 IER2Q9BTL4 223 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 CCDC94Q9BW85 323 aaPredicted RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 TARS2Q9BW92 718 aaKnown RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 LRRC3Q9BY71 257 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 CDT1Q9H211 546 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 BHMT2Q9H2M3 363 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 TRPV4Q9HBA0 871 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 TOPORSQ9NS56 1045 aaPredicted RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 SLC38A7Q9NVC3 462 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 AFF4Q9UHB7 1163 aaKnown RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 GMEB2Q9UKD1 530 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 RCOR1Q9UKL0 485 aa6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 CDV3Q9UKY7 258 aaKnown RBP6.77□□□□□ -1.33
CHRNA6-202ENST00000529467 MAFFQ9ULX9 164 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms