RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 SCARA3Q6AZY7 606 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 ADHFE1Q8IWW8 467 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 GUF1Q8N442 669 aaKnown RBP12.13□□□□□ -0.47
CTSB-214ENST00000527243 XXYLT1Q8NBI6 393 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 GOLGA5Q8TBA6 731 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 ZNF707Q96C28 371 aaPredicted RBP12.13□□□□□ -0.47
CTSB-214ENST00000527243 FAM84AQ96KN4 292 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 PLEKHA4Q9H4M7 779 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 SFXN1Q9H9B4 322 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 MAN1C1Q9NR34 630 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 DPP3Q9NY33 737 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 SIX4Q9UIU6 781 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 TRAF3IP3Q9Y228 551 aa12.13□□□□□ -0.47
CTSB-214ENST00000527243 CYP11A1P05108 521 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 TYMPP19971 482 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 OR1D2P34982 312 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 CYP2J2P51589 502 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 CYP24A1Q07973 514 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 MYBPC2Q14324 1141 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 CBX2Q14781 532 aaPredicted RBP12.12□□□□□ -0.47
CTSB-214ENST00000527243 PSMD6Q15008 389 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 SNRNP35Q16560 246 aaKnown RBP12.12□□□□□ -0.47
CTSB-214ENST00000527243 NFIL3Q16649 462 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 COBLL1Q53SF7 1204 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 RARS2Q5T160 578 aaKnown RBP12.12□□□□□ -0.47
CTSB-214ENST00000527243 CCDC183Q5T5S1 534 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 LRSAM1Q6UWE0 723 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 C15orf39Q6ZRI6 1047 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 GPR149Q86SP6 731 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 PALB2Q86YC2 1186 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 GLYCTKQ8IVS8 523 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 KREMEN2Q8NCW0 462 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 OR5B17Q8NGF7 314 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 PLEKHO2Q8TD55 490 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 SENP8Q96LD8 212 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 MFSD14AQ96MC6 490 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 APOL5Q9BWW9 433 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 PHF7Q9BWX1 381 aaPredicted RBP12.12□□□□□ -0.47
CTSB-214ENST00000527243 INTS13Q9NVM9 706 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 FBXL5Q9UKA1 691 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 C5orf42Q9H799 3197 aa12.12□□□□□ -0.47
CTSB-214ENST00000527243 PLXNA3P51805 1871 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 LOC730098B7Z3J9 87 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 H7C4K7 107 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 RFPL2O75678 378 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 ZMYND10O75800 440 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 ABLIM3O94929 683 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 SPATA31D3P0C874 917 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 MCCD1P59942 119 aaPredicted RBP12.11□□□□□ -0.47
CTSB-214ENST00000527243 TFAMQ00059 246 aaKnown RBP12.11□□□□□ -0.47
CTSB-214ENST00000527243 ROR1Q01973 937 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 SURF1Q15526 300 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 TMC5Q6UXY8 1006 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 CYP26C1Q6V0L0 522 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 SPATA31D4Q6ZUB0 917 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 LRRC52Q8N7C0 313 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 CCDC47Q96A33 483 aaKnown RBP12.11□□□□□ -0.47
CTSB-214ENST00000527243 CCDC34Q96HJ3 373 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 MTMR12Q9C0I1 747 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 POMKQ9H5K3 350 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 ZDHHC7Q9NXF8 308 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 DPP7Q9UHL4 492 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 ITGA11Q9UKX5 1188 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 CDY1Q9Y6F8 540 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 SCN1AP35498 2009 aa12.11□□□□□ -0.47
CTSB-214ENST00000527243 WDR27A2RRH5 827 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 TNFRSF10AO00220 468 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 VNN2O95498 520 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 NR3C1P04150 777 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 POU2F2P09086 479 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 WEE2P0C1S8 567 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 POLR2BP30876 1174 aaKnown RBP12.1□□□□□ -0.47
CTSB-214ENST00000527243 HOXA9P31269 272 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 MTHFRP42898 656 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 CASP4P49662 377 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 TAF6P49848 677 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 CLDN10P78369 228 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 CCDC173Q0VFZ6 552 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 LMBRD2Q68DH5 695 aaPredicted RBP12.1□□□□□ -0.47
CTSB-214ENST00000527243 ZNF280DQ6N043 979 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 CES5AQ6NT32 575 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 LIMS2Q7Z4I7 341 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 WDR49Q8IV35 697 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 SMYD4Q8IYR2 804 aaPredicted RBP12.1□□□□□ -0.47
CTSB-214ENST00000527243 GJD3Q8N144 294 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 ZNF461Q8TAF7 563 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 CACTINQ8WUQ7 758 aaKnown RBP12.1□□□□□ -0.47
CTSB-214ENST00000527243 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 ERCC4Q92889 916 aaPredicted RBP12.1□□□□□ -0.47
CTSB-214ENST00000527243 NECTIN4Q96NY8 510 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 CGRRF1Q99675 332 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 RTP3Q9BQQ7 232 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 TMEM63CQ9P1W3 806 aa12.1□□□□□ -0.47
CTSB-214ENST00000527243 TIMM13Q9Y5L4 95 aaPredicted RBP12.1□□□□□ -0.47
CTSB-214ENST00000527243 CCDC195A0A1B0GUA6 201 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 MAPK13O15264 365 aa12.09□□□□□ -0.47
CTSB-214ENST00000527243 EXOC3O60645 756 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms