RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 GAGE13Q4V321 117 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 HS1BP3Q53T59 392 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 CT83Q5H943 113 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 PITRM1Q5JRX3 1037 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 DDX42Q86XP3 938 aaKnown RBP eCLIP5.43□□□□□ -1.54
USP48-211ENST00000526044 TICAM2Q86XR7 235 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 FUKQ8N0W3 1084 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 ANKRD53Q8N9V6 530 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 CNBD1Q8NA66 436 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 SLC16A11Q8NCK7 471 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 OR14C36Q8NHC7 312 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 Q8TCH9 128 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 SUCLG2Q96I99 432 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 RPL10LQ96L21 214 aaKnown RBP5.43□□□□□ -1.54
USP48-211ENST00000526044 C8orf49Q96NF6 230 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 OR14A2Q96R54 314 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 UIMC1Q96RL1 719 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 FAM126AQ9BYI3 521 aaPredicted RBP5.43□□□□□ -1.54
USP48-211ENST00000526044 RWDD1Q9H446 243 aaPredicted RBP5.43□□□□□ -1.54
USP48-211ENST00000526044 CD248Q9HCU0 757 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 ATP8A1Q9Y2Q0 1164 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 LRRFIP2Q9Y608 721 aaKnown RBP5.43□□□□□ -1.54
USP48-211ENST00000526044 CDHR2Q9BYE9 1310 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 CARMIL3Q8ND23 1372 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 N4BP2Q86UW6 1770 aaPredicted RBP5.42□□□□□ -1.54
USP48-211ENST00000526044 MARCH6O60337 910 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 SEC24DO94855 1032 aaPredicted RBP5.42□□□□□ -1.54
USP48-211ENST00000526044 JUNP05412 331 aaKnown RBP5.42□□□□□ -1.54
USP48-211ENST00000526044 CSF1RP07333 972 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 VSIG10L2P0DP72 767 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 GAAP10253 952 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 NCLP19338 710 aaKnown RBP5.42□□□□□ -1.54
USP48-211ENST00000526044 ENPP1P22413 925 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 KIR2DL3P43628 341 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 CD69Q07108 199 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 PPARAQ07869 468 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 DUSP8Q13202 625 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 RIN1Q13671 783 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 GRM7Q14831 915 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 ACAP1Q15027 740 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 CCDC57Q2TAC2 916 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 EPHA10Q5JZY3 1008 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 PRR5LQ6MZQ0 368 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 LMBR1LQ6UX01 489 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 NOL8Q76FK4 1167 aaKnown RBP5.42□□□□□ -1.54
USP48-211ENST00000526044 LYSMD2Q8IV50 215 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 SLC41A1Q8IVJ1 513 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 GPR135Q8IZ08 494 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 UNC5BQ8IZJ1 945 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 EAF2Q96CJ1 260 aaPredicted RBP5.42□□□□□ -1.54
USP48-211ENST00000526044 AHCYL2Q96HN2 611 aaKnown RBP5.42□□□□□ -1.54
USP48-211ENST00000526044 KAZALD1Q96I82 304 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 RAX2Q96IS3 184 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 BRIP1Q9BX63 1249 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 BICC1Q9H694 974 aaKnown RBP5.42□□□□□ -1.54
USP48-211ENST00000526044 SPON1Q9HCB6 807 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 VTA1Q9NP79 307 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.42□□□□□ -1.54
USP48-211ENST00000526044 PLA2G3Q9NZ20 509 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 TCAF1Q9Y4C2 921 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 SLC30A1Q9Y6M5 507 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 SCN7AQ01118 1682 aa5.42□□□□□ -1.54
USP48-211ENST00000526044 A0A1W2PRX2 142 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 ANKRD18BA2A2Z9 1011 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 H0YIN7 160 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 MATN3O15232 486 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 HMMRO75330 724 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 PRKD3O94806 890 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 TOX4O94842 621 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 LPLP06858 475 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 LGALS4P56470 323 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 SCAND1P57086 179 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 IFIT5Q13325 482 aaKnown RBP5.41□□□□□ -1.54
USP48-211ENST00000526044 TRIM25Q14258 630 aaKnown RBP5.41□□□□□ -1.54
USP48-211ENST00000526044 SF3B3Q15393 1217 aaKnown RBP5.41□□□□□ -1.54
USP48-211ENST00000526044 CCDC152Q4G0S7 254 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 KRT40Q6A162 431 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 CEP85Q6P2H3 762 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 GAREM2Q75VX8 874 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 POLNQ7Z5Q5 900 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 GLB1L2Q8IW92 636 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 ANKRD44Q8N8A2 993 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 LMBR1Q8WVP7 490 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 DVL3Q92997 716 aaPredicted RBP5.41□□□□□ -1.54
USP48-211ENST00000526044 CCDC136Q96JN2 1154 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 WWC2-AS2Q96NR7 200 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 SORCS2Q96PQ0 1159 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 GPHA2Q96T91 129 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 FDXACB1Q9BRP7 624 aaPredicted RBP5.41□□□□□ -1.54
USP48-211ENST00000526044 C1QTNF3Q9BXJ4 246 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 KLC2Q9H0B6 622 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 KCTD10Q9H3F6 313 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 AGO3Q9H9G7 860 aaKnown RBP5.41□□□□□ -1.54
USP48-211ENST00000526044 PRDM16Q9HAZ2 1276 aa5.41□□□□□ -1.54
USP48-211ENST00000526044 MYH3P11055 1940 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 PNMA6EA0A0J9YXQ4 647 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 MTSS1O43312 755 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 SURF6O75683 361 aaKnown RBP5.4□□□□□ -1.54
USP48-211ENST00000526044 LY86O95711 162 aa5.4□□□□□ -1.54
USP48-211ENST00000526044 IGHDP01880 384 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms