RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ENPP3O14638 875 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 FYB1O15117 783 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 ULK1O75385 1050 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 GUCY1B3Q02153 619 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 MST1LQ2TV78 715 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 PDCD4Q53EL6 469 aaKnown RBP3.94□□□□□ -1.78
CSDE1-208ENST00000524652 FAM102AQ5T9C2 384 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-208ENST00000524652 ANKS6Q68DC2 871 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 ARMC6Q6NXE6 501 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 OLFML1Q6UWY5 402 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 JAZF1Q86VZ6 243 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 LCORLQ8N3X6 602 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 CPEB3Q8NE35 698 aaKnown RBP3.94□□□□□ -1.78
CSDE1-208ENST00000524652 MDM1Q8TC05 714 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 USP7Q93009 1102 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 ZNF764Q96H86 408 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-208ENST00000524652 RAX2Q96IS3 184 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 WDR11Q9BZH6 1224 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 ANKFY1Q9P2R3 1169 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 RPTORQ8N122 1335 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 TTC21AQ8NDW8 1320 aa3.94□□□□□ -1.78
CSDE1-208ENST00000524652 COL3A1P02461 1466 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-208ENST00000524652 BRD4O60885 1362 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-208ENST00000524652 JCADQ9P266 1359 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-208ENST00000524652 PIPSLA2A3N6 862 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 ZNF185O15231 689 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 ZEB2O60315 1214 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 NDUFA10O95299 355 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 LPLP06858 475 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 TYRP1P17643 537 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 ENPP1P22413 925 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 DDX6P26196 483 aaKnown RBP eCLIP3.93□□□□□ -1.784e-6■□□□□ 10
CSDE1-208ENST00000524652 SESN3P58005 492 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 PDCD1Q15116 288 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 UGT8Q16880 541 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 CCDC142Q17RM4 750 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 CT83Q5H943 113 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 TAF7LQ5H9L4 462 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 PRAMEF14Q5SWL7 426 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 STRIP1Q5VSL9 837 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 ABHD17BQ5VST6 288 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 HDGFL2Q7Z4V5 671 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-208ENST00000524652 LEO1Q8WVC0 666 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-208ENST00000524652 LINC00476Q8WZB0 136 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 LRRC59Q96AG4 307 aaKnown RBP3.93□□□□□ -1.78
CSDE1-208ENST00000524652 CEP95Q96GE4 821 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 IFT22Q9H7X7 185 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 SYNPO2LQ9H987 977 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 TERF2IPQ9NYB0 399 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 PTGFRNQ9P2B2 879 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 APOBEC2Q9Y235 224 aaKnown RBP3.93□□□□□ -1.78
CSDE1-208ENST00000524652 FPGT-TNNI3KV9GXZ4 949 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 SMG6Q86US8 1419 aaKnown RBP3.93□□□□□ -1.78
CSDE1-208ENST00000524652 SBF2Q86WG5 1849 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 GLI3P10071 1580 aa3.93□□□□□ -1.78
CSDE1-208ENST00000524652 ARHGEF10O15013 1369 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 PARD3Q8TEW0 1356 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 NPC1L1Q9UHC9 1359 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 SLIT2O94813 1529 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 ABCC6O95255 1503 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 SNRPA1P09661 255 aaKnown RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 HKR1P10072 659 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 MYCLP1P12525 358 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 MXRA7P84157 204 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 FAM47AQ5JRC9 791 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 MFSD14BQ5SR56 506 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 CC2D1BQ5T0F9 858 aaKnown RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 AGAP9Q5VTM2 703 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 METRNLQ641Q3 311 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 SYCE2Q6PIF2 218 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 ZNF572Q7Z3I7 529 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 ADGRG3Q86Y34 549 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 CMTR2Q8IYT2 770 aaKnown RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 RNF169Q8NCN4 708 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 CLRN3Q8NCR9 226 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 EAF2Q96CJ1 260 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 BBC3Q96PG8 261 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 TTC1Q99614 292 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 ADAM2Q99965 735 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 TEX101Q9BY14 249 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 TOPORSQ9NS56 1045 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 USP15Q9Y4E8 981 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 EPN1Q9Y6I3 576 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 PARP4Q9UKK3 1724 aaKnown RBP3.92□□□□□ -1.78
CSDE1-208ENST00000524652 BCL9LQ86UU0 1499 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 LRRC37A3O60309 1634 aa3.92□□□□□ -1.78
CSDE1-208ENST00000524652 CPDO75976 1380 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 NSD2O96028 1365 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 KIAA0232Q92628 1395 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 THSD7AQ9UPZ6 1657 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 POLR2AP24928 1970 aaKnown RBP3.91□□□□□ -1.78
CSDE1-208ENST00000524652 DRGXA6NNA5 263 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 KIAA0355O15063 1070 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 ADCY6O43306 1168 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 CDKL5O76039 1030 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 CFIP05156 583 aa3.91□□□□□ -1.78
CSDE1-208ENST00000524652 CLK3P49761 638 aaKnown RBP3.91□□□□□ -1.78
CSDE1-208ENST00000524652 SEC24CP53992 1094 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms