RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 MMP3P08254 477 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 KRT10P13645 584 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 ATP1A2P50993 1020 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 BPIFB4P59827 614 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 GCNT1Q02742 428 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 DUSP28Q4G0W2 176 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 CFAP58Q5T655 872 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 CYP4F22Q6NT55 531 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 GSTA5Q7RTV2 222 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 ERICH1Q86X53 443 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 MMGT1Q8N4V1 131 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 CCDC26Q8TAB7 109 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 GOLGA2P5Q9HBQ8 144 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 HMGXB4Q9UGU5 601 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 ATP8A1Q9Y2Q0 1164 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 UTP11Q9Y3A2 253 aaKnown RBP12.52□□□□□ -0.41
PTPRK-216ENST00000524481 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 HPDP32754 393 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-216ENST00000524481 TUBB4BP68371 445 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 FAM110CQ1W6H9 321 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 CLEC16AQ2KHT3 1053 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-216ENST00000524481 TWF2Q6IBS0 349 aaKnown RBP12.52□□□□□ -0.41
PTPRK-216ENST00000524481 MCOLN2Q8IZK6 566 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 TSEN2Q8NCE0 465 aaKnown RBP12.52□□□□□ -0.41
PTPRK-216ENST00000524481 PPTC7Q8NI37 304 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 TFAP2BQ92481 460 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 EIF2AQ9BY44 585 aaKnown RBP12.52□□□□□ -0.41
PTPRK-216ENST00000524481 ISCUQ9H1K1 167 aa12.52□□□□□ -0.41
PTPRK-216ENST00000524481 PRMT7Q9NVM4 692 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-216ENST00000524481 RLFQ13129 1914 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 HSF2BPO75031 334 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 RARBP10826 455 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 ZNF484Q5JVG2 852 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 SCYL2Q6P3W7 929 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 ANKRD23Q86SG2 305 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 C18orf25Q96B23 403 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-216ENST00000524481 MRRFQ96E11 262 aaKnown RBP12.51□□□□□ -0.41
PTPRK-216ENST00000524481 HPDLQ96IR7 371 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 NIF3L1Q9GZT8 377 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 CPSF3Q9UKF6 684 aaKnown RBP12.51□□□□□ -0.41
PTPRK-216ENST00000524481 SYNJ2BP-COX16A0A087WUM0 186 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 MAGEB2O15479 319 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 HCRTO43612 131 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 LGR5O75473 907 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 IFNB1P01574 187 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 DR1Q01658 176 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 C1orf127Q8N9H9 656 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 OR6B3Q8NGW1 331 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 MIS12Q9H081 205 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 CCDC113Q9H0I3 377 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 COX16Q9P0S2 106 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 KAT6AQ92794 2004 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 MAPK13O15264 365 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 RNF40O75150 1001 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 MAP3K6O95382 1288 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 SMIM10L2AP0DMW4 78 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 SMIM10L2BP0DMW5 78 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 TCF4P15884 667 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 SLC26A2P50443 739 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 CRHR2Q13324 411 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 TMEM132DQ14C87 1099 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 PAN2Q504Q3 1202 aaKnown RBP12.51□□□□□ -0.41
PTPRK-216ENST00000524481 SYCP2LQ5T4T6 812 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 DNAJC24Q6P3W2 148 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 WDR49Q8IV35 697 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 ABRAQ8N0Z2 381 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 SHCBP1Q8NEM2 672 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 NXF3Q9H4D5 531 aaKnown RBP12.51□□□□□ -0.41
PTPRK-216ENST00000524481 ASIC3Q9UHC3 531 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 DAAM1Q9Y4D1 1078 aa12.51□□□□□ -0.41
PTPRK-216ENST00000524481 F8VP50 259 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 HOXC6P09630 235 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 GZMAP12544 262 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 CTNNA2P26232 953 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 FLT3P36888 993 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 RWDD2BP57060 319 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 DHX9Q08211 1270 aaKnown RBP12.5□□□□□ -0.41
PTPRK-216ENST00000524481 IFFO1Q0D2I5 559 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 PAK2Q13177 524 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 SLC10A6Q3KNW5 377 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 WDR93Q6P2C0 686 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 RUFY4Q6ZNE9 571 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 DDX1Q92499 740 aaKnown RBP12.5□□□□□ -0.41
PTPRK-216ENST00000524481 HES6Q96HZ4 224 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 FAM107BQ9H098 131 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 FZD8Q9H461 694 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 C10orf88Q9H8K7 445 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 FAM204AQ9H8W3 233 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 GTF3C4Q9UKN8 822 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 PPEF2O14830 753 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 ASS1P00966 412 aaKnown RBP12.5□□□□□ -0.41
PTPRK-216ENST00000524481 ELNP15502 786 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 TBXAS1P24557 533 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-216ENST00000524481 TRIM32Q13049 653 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 MAP2K5Q13163 448 aa12.5□□□□□ -0.41
PTPRK-216ENST00000524481 SGO2Q562F6 1265 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms