RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 CCZ1P86791 482 aaPredicted RBP10.01□□□□□ -0.81
SDCBP-212ENST00000523483 SLC47A2Q86VL8 602 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 ACRBPQ8NEB7 543 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 APBB2Q92870 758 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 NHEJ1Q9H9Q4 299 aaPredicted RBP10.01□□□□□ -0.81
SDCBP-212ENST00000523483 SLC38A7Q9NVC3 462 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 PDE4DIPQ5VU43 2346 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 PODXLO00592 558 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 P4HA1P13674 534 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 FIGNQ5HY92 759 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 WDR59Q6PJI9 974 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 TOGARAM2Q6ZUX3 1019 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 ZNF365Q70YC5 407 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 CEP57Q86XR8 500 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 PASD1Q8IV76 773 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 CCDC112Q8NEF3 446 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 PANX2Q96RD6 677 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 HTATIP2Q9BUP3 242 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 XYLT2Q9H1B5 865 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 CISHQ9NSE2 258 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 TMEM161AQ9NX61 479 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 DNAJB4Q9UDY4 337 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 TFR2Q9UP52 801 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 A0A1W2PQJ5 194 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 CA8P35219 290 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 BRCC3P46736 316 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 TAF6P49848 677 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 PTK2Q05397 1052 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 GFPT1Q06210 699 aaPredicted RBP10.01□□□□□ -0.81
SDCBP-212ENST00000523483 CNKSR3Q6P9H4 555 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 ALKAL1Q6UXT8 129 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 RAD9BQ6WBX8 426 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 RPUSD2Q8IZ73 545 aaKnown RBP10.01□□□□□ -0.81
SDCBP-212ENST00000523483 DNAJC7Q99615 494 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 TBC1D13Q9NVG8 400 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 ARHGAP20Q9P2F6 1191 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 SIP14410 1827 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 KPNA7A9QM74 516 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 HCRTO43612 131 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 CAPN15O75808 1086 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 FPGSQ05932 587 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 GLYCTKQ8IVS8 523 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 SLC20A1Q8WUM9 679 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 ZNF560Q96MR9 790 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 PPP1R10Q96QC0 940 aaKnown RBP10□□□□□ -0.81
SDCBP-212ENST00000523483 YME1L1Q96TA2 773 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 SPTLC1O15269 473 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 HUS1O60921 280 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 DDHD2O94830 711 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 EOMESO95936 686 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 KCNE1P15382 129 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 TBXAS1P24557 533 aaPredicted RBP10□□□□□ -0.81
SDCBP-212ENST00000523483 PDE6CP51160 858 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 SPA17Q15506 151 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 ZNF598Q86UK7 904 aaKnown RBP10□□□□□ -0.81
SDCBP-212ENST00000523483 NT5DC4Q86YG4 428 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 TMTC1Q8IUR5 882 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 RBBP8NLQ8NC74 664 aaPredicted RBP10□□□□□ -0.81
SDCBP-212ENST00000523483 IQCDQ96DY2 449 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 UBN1Q9NPG3 1134 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 LZTFL1Q9NQ48 299 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 HMGXB4Q9UGU5 601 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 ZKSCAN5Q9Y2L8 839 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 KIAA0355O15063 1070 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 ARHGAP6O43182 974 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 THAP12O43422 761 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 PARNO95453 639 aaKnown RBP10□□□□□ -0.81
SDCBP-212ENST00000523483 ITGB1P05556 798 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 ACAT1P24752 427 aaKnown RBP10□□□□□ -0.81
SDCBP-212ENST00000523483 LILRA4P59901 499 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 GCNT1Q02742 428 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 GRIK3Q13003 919 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 MRPL10Q7Z7H8 261 aaKnown RBP10□□□□□ -0.81
SDCBP-212ENST00000523483 KIAA1328Q86T90 577 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 VPS36Q86VN1 386 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 C3orf58Q8NDZ4 430 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 NUCKS1Q9H1E3 243 aaKnown RBP10□□□□□ -0.81
SDCBP-212ENST00000523483 MYO7AQ13402 2215 aa10□□□□□ -0.81
SDCBP-212ENST00000523483 A8MXQ7 604 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 CYB561D2O14569 222 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 B4GALT3O60512 393 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 CCDC172P0C7W6 258 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 FERP16591 822 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 ASPAP45381 313 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 KIF11P52732 1056 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 NAP1L1P55209 391 aaKnown RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 TUSC3Q13454 348 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 APPL2Q8NEU8 664 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 HEXIM2Q96MH2 286 aaKnown RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 FAM49BQ9NUQ9 324 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 EPN1Q9Y6I3 576 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 TADA2AO75478 443 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 FGBP02675 491 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 CXCL10P02778 98 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 AMHP03971 560 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 SERPING1P05155 500 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 ABCB4P21439 1286 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 TNFAIP3P21580 790 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 GNA15P30679 374 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms