RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 HHIPL1Q96JK4 782 aa19.71■□□□□ 0.75
TRAPPC9-210ENST00000521667 NAP1L3Q99457 506 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC9-210ENST00000521667 GCOM2Q9BZD3 368 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC9-210ENST00000521667 AP5M1Q9H0R1 490 aa19.71■□□□□ 0.75
TRAPPC9-210ENST00000521667 SPOPO43791 374 aa19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 IGHA2P01877 340 aa19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 GLI1P08151 1106 aa19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 WEE2P0C1S8 567 aa19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 CTGFP29279 349 aa19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 IRX5P78411 483 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 LIN9Q5TKA1 542 aa19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 PHF13Q86YI8 300 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 IFT20Q8IY31 132 aa19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 FAXDC2Q96IV6 333 aa19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 VCPIP1Q96JH7 1222 aa19.7■□□□□ 0.74
TRAPPC9-210ENST00000521667 HAS3O00219 553 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 RAD51CO43502 376 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 GPR32O75388 356 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 CYP2C9P11712 490 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 FGFR4P22455 802 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 PSEN2P49810 448 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 PEX5P50542 639 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 TMEM62Q0P6H9 643 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 ZNF211Q13398 564 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 ZNF667Q5HYK9 610 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 AENQ8WTP8 325 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 PPP1R13LQ8WUF5 828 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 ACAP3Q96P50 834 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 UBXN6Q9BZV1 441 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 GDF3Q9NR23 364 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 ADAM22Q9P0K1 906 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 NXF1Q9UBU9 619 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 ANAPC7Q9UJX3 599 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 GINS2Q9Y248 185 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 MROH7Q68CQ1 1323 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 A0A0U1RQG5 324 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 CCDC66A2RUB6 948 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 ITGB3P05106 788 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 MYL3P08590 195 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 ITGA4P13612 1032 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 CTNNA2P26232 953 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 SSTR3P32745 418 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 CTNNA1P35221 906 aaKnown RBP19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 TNNT3P45378 269 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 MARCKSL1P49006 195 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 DCAF4L1Q3SXM0 396 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 ZNF394Q53GI3 561 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 C11orf70Q9BRQ4 267 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 POLIQ9UNA4 740 aa19.69■□□□□ 0.74
TRAPPC9-210ENST00000521667 ATICP31939 592 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 GRM5P41594 1212 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 GUCY2DQ02846 1103 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 C1QBPQ07021 282 aaKnown RBP19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 SMC1AQ14683 1233 aaKnown RBP19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 TMEM132DQ14C87 1099 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 C2CD6Q53TS8 623 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 RUFY4Q6ZNE9 571 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 APBB1IPQ7Z5R6 666 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 CXorf38Q8TB03 319 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 BCO2Q9BYV7 579 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 EPB41L5Q9HCM4 733 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 PCDHA3Q9Y5H8 950 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 ANK1P16157 1881 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 SART1O43290 800 aaKnown RBP19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 LSM8O95777 96 aaKnown RBP19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 BRD2P25440 801 aaKnown RBP19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 ADAM17P78536 824 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 BEX3Q00994 111 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 PCBP1Q15365 356 aaKnown RBP eCLIP19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 WDR72Q3MJ13 1102 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 CATSPER4Q7RTX7 472 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 CPNE8Q86YQ8 564 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 DDX47Q9H0S4 455 aaKnown RBP19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 SLITRK6Q9H5Y7 841 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 VIPAS39Q9H9C1 493 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 C2CD2Q9Y426 696 aa19.68■□□□□ 0.74
TRAPPC9-210ENST00000521667 CENPFP49454 3210 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 CA12O43570 354 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 HOXA11P31270 313 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 EPHB4P54760 987 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 PTP4A2Q12974 167 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 HIC1Q14526 733 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 MMS22LQ6ZRQ5 1243 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 PHLDB2Q86SQ0 1253 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 NT5DC4Q86YG4 428 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 CD302Q8IX05 232 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 OSMRQ99650 979 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 KATNAL1Q9BW62 490 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 ARHGAP39Q9C0H5 1083 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 VRTNQ9H8Y1 702 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 CDHR5Q9HBB8 845 aa19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 MRPL47Q9HD33 250 aaKnown RBP19.67■□□□□ 0.74
TRAPPC9-210ENST00000521667 ZSCAN5CA6NGD5 496 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC9-210ENST00000521667 NPTXRO95502 500 aa19.66■□□□□ 0.74
TRAPPC9-210ENST00000521667 DARSP14868 501 aaKnown RBP19.66■□□□□ 0.74
TRAPPC9-210ENST00000521667 GLIPR1L2Q4G1C9 344 aa19.66■□□□□ 0.74
TRAPPC9-210ENST00000521667 SEL1L2Q5TEA6 688 aa19.66■□□□□ 0.74
TRAPPC9-210ENST00000521667 LLGL2Q6P1M3 1020 aa19.66■□□□□ 0.74
TRAPPC9-210ENST00000521667 SLC27A1Q6PCB7 646 aa19.66■□□□□ 0.74
TRAPPC9-210ENST00000521667 CAPNS2Q96L46 248 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms