RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 EPB41P11171 864 aaKnown RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 MCCD1P59942 119 aaPredicted RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 MYL6P60660 151 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 TYRO3Q06418 890 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 DSTYKQ6XUX3 929 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 VN1R2Q8NFZ6 395 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 CEP63Q96MT8 703 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 KLHL5Q96PQ7 755 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 CLSTN3Q9BQT9 956 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 DNAJC25Q9H1X3 360 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 ARMCX3Q9UH62 379 aaPredicted RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 IRAK3Q9Y616 596 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 CITO14578 2027 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 VCANP13611 3396 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 TDRD15B5MCY1 1934 aaKnown RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 PLXNA4Q9HCM2 1894 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 M0QZQ0 153 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 CYB561D2O14569 222 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 IKBKBO14920 756 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 SLC16A3O15427 465 aaKnown RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 TRAPPC3O43617 180 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 CLASP2O75122 1294 aaKnown RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 PHACTR2O75167 634 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 SPATA31D3P0C874 917 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 KRT13P13646 458 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 ERCC5P28715 1186 aaPredicted RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 TAF6P49848 677 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 DLX2Q07687 328 aaPredicted RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 BIRC3Q13489 604 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 ZACNQ401N2 412 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 LLGL2Q6P1M3 1020 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 FOXR2Q6PJQ5 311 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 C15orf39Q6ZRI6 1047 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 SPATA31D4Q6ZUB0 917 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 PALB2Q86YC2 1186 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 FEZF2Q8TBJ5 459 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 HPDLQ96IR7 371 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 XYLT2Q9H1B5 865 aa13.34□□□□□ -0.27
CLK4-208ENST00000520957 SAMSN1Q9NSI8 373 aaKnown RBP13.34□□□□□ -0.27
CLK4-208ENST00000520957 ELAVL2Q12926 359 aaKnown RBP13.33□□□□□ -0.28
CLK4-208ENST00000520957 NCOA4Q13772 614 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 MRPL58Q14197 206 aaKnown RBP13.33□□□□□ -0.28
CLK4-208ENST00000520957 SKIV2LQ15477 1246 aaKnown RBP13.33□□□□□ -0.28
CLK4-208ENST00000520957 CCDC40Q4G0X9 1142 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 CBWD6Q4V339 395 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 DCAF17Q5H9S7 520 aaPredicted RBP13.33□□□□□ -0.28
CLK4-208ENST00000520957 CBWD3Q5JTY5 395 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 CBWD5Q5RIA9 395 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 TCERG1LQ5VWI1 586 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 WSCD1Q658N2 575 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 PDE12Q6L8Q7 609 aaKnown RBP13.33□□□□□ -0.28
CLK4-208ENST00000520957 EP400NLQ6ZTU2 488 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 TAS1R2Q8TE23 839 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 PIK3R5Q8WYR1 880 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 SLC35C1Q96A29 364 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 PI4K2AQ9BTU6 479 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 RXFP1Q9HBX9 757 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 ANO10Q9NW15 660 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 SNX9Q9Y5X1 595 aa13.33□□□□□ -0.28
CLK4-208ENST00000520957 COL4A4P53420 1690 aaPredicted RBP13.33□□□□□ -0.28
CLK4-208ENST00000520957 RALGAPA2Q2PPJ7 1873 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 HCRTO43612 131 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 KLRC2P26717 231 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 LTBRP36941 435 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 TRPC3Q13507 836 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 PSMD5Q16401 504 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 STX1AQ16623 288 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 DUSP6Q16828 381 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 SPOPLQ6IQ16 392 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 FRMD5Q7Z6J6 570 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 LRRC52Q8N7C0 313 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 SEMA4DQ92854 862 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
CLK4-208ENST00000520957 FUCA2Q9BTY2 467 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 C5orf42Q9H799 3197 aa13.32□□□□□ -0.28
CLK4-208ENST00000520957 SYN3O14994 580 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 TBC1D4O60343 1298 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 GLP2RO95838 553 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 HLA-DRAP01903 254 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 EPCAMP16422 314 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 PTMSP20962 102 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 OR1D2P34982 312 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 ARPP19P56211 112 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 ADAM15Q13444 863 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 KCNC3Q14003 757 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 SOWAHAQ2M3V2 549 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 SKOR2Q2VWA4 1001 aaPredicted RBP13.31□□□□□ -0.28
CLK4-208ENST00000520957 WDR72Q3MJ13 1102 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 ZSCAN23Q3MJ62 389 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 ANO6Q4KMQ2 910 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 TRIM59Q8IWR1 403 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 PDCL2Q8N4E4 241 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 TMEM209Q96SK2 561 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 RTP3Q9BQQ7 232 aa13.31□□□□□ -0.28
CLK4-208ENST00000520957 NXF1Q9UBU9 619 aaKnown RBP13.31□□□□□ -0.28
CLK4-208ENST00000520957 STK39Q9UEW8 545 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms