RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 SYN2Q92777 582 aaPredicted RBP23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 DPF3Q92784 378 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 CASD1Q96PB1 797 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 TBC1D13Q9NVG8 400 aa23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 ZNHIT6Q9NWK9 470 aaKnown RBP23.05■■□□□ 1.28
PTP4A3-203ENST00000520105 SPTLC1O15269 473 aa23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 B4GALT3O60512 393 aa23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 DDHD2O94830 711 aa23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 STAU1O95793 577 aaKnown RBP23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 TBXAS1P24557 533 aaPredicted RBP23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 FPGSQ05932 587 aa23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 MEA1Q16626 185 aa23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 ENOSF1Q7L5Y1 443 aa23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 IRF2BP2Q7Z5L9 587 aa23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 TMCO2Q7Z6W1 182 aaPredicted RBP23.04■■□□□ 1.28
PTP4A3-203ENST00000520105 PLEKP08567 350 aaPredicted RBP23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 RAP1GAPP47736 663 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 EPHB4P54760 987 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 CDH8P55286 799 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 DEFB103AP81534 67 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 PPIGQ13427 754 aaKnown RBP eCLIP23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 TUSC3Q13454 348 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 ZNF365Q70YC5 407 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 FAM81BQ96LP2 452 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 KANSL3Q9P2N6 904 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 SNX9Q9Y5X1 595 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 LTBP2Q14767 1821 aa23.03■■□□□ 1.28
PTP4A3-203ENST00000520105 PODXLO00592 558 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 ACO1P21399 889 aaKnown RBP23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 FECHP22830 423 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 LILRA4P59901 499 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 RNASELQ05823 741 aaKnown RBP23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 ASIC2Q16515 512 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 UPP1Q16831 310 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 HS1BP3Q53T59 392 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 HGSNATQ68CP4 663 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 FAM71AQ8IYT1 594 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 MMS19Q96T76 1030 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 SMYD3Q9H7B4 428 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 SOWAHDA6NJG2 315 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 KPNA7A9QM74 516 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 KRT5P13647 590 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 CD58P19256 250 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 TAF6P49848 677 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 WDR5P61964 334 aaKnown RBP23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 C3orf58Q8NDZ4 430 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 CCDC112Q8NEF3 446 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 TOP1MTQ969P6 601 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 BCO2Q9BYV7 579 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 SDCBP2Q9H190 292 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 ACP6Q9NPH0 428 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 ARHGAP20Q9P2F6 1191 aa23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 LAMA2P24043 3122 aaKnown RBP23.02■■□□□ 1.28
PTP4A3-203ENST00000520105 TBKBP1A7MCY6 615 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 CYP26A1O43174 497 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 HOXA2O43364 376 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 FGBP02675 491 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 RPL9P32969 192 aaKnown RBP23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 TNNC1P63316 161 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 MTF1Q14872 753 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 FAM117BQ6P1L5 589 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 CYP26C1Q6V0L0 522 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 ZNF560Q96MR9 790 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 CISHQ9NSE2 258 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 RNF216Q9NWF9 866 aaPredicted RBP23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 HCSTQ9UBK5 93 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 PCDHB4Q9Y5E5 795 aa23.01■■□□□ 1.27
PTP4A3-203ENST00000520105 AMHP03971 560 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 P4HA1P13674 534 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 CLCN1P35523 988 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 PNPLA4P41247 253 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 DSC1Q08554 894 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 KLHL30Q0D2K2 578 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 TMEM270Q6UE05 265 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 TMTC1Q8IUR5 882 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 JAKMIP2Q96AA8 810 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 DNAJB4Q9UDY4 337 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 EFCAB14O75071 495 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 BAIAP3O94812 1187 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 SERPING1P05155 500 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 FERP16591 822 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 CDK17Q00537 523 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 SV2CQ496J9 727 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 PAN2Q504Q3 1202 aaKnown RBP23■■□□□ 1.27
PTP4A3-203ENST00000520105 COLGALT2Q8IYK4 626 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 TNS4Q8IZW8 715 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 UBR7Q8N806 425 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 FAXDC2Q96IV6 333 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 HAUS4Q9H6D7 363 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 PYCARDQ9ULZ3 195 aa23■■□□□ 1.27
PTP4A3-203ENST00000520105 GTF3C5Q9Y5Q8 519 aaPredicted RBP23■■□□□ 1.27
PTP4A3-203ENST00000520105 FNDC1Q4ZHG4 1894 aaPredicted RBP23■■□□□ 1.27
PTP4A3-203ENST00000520105 ZBBXA8MT70 800 aa22.99■■□□□ 1.27
PTP4A3-203ENST00000520105 F8W810 466 aa22.99■■□□□ 1.27
PTP4A3-203ENST00000520105 NRDCO43847 1150 aa22.99■■□□□ 1.27
PTP4A3-203ENST00000520105 DGKIO75912 1065 aa22.99■■□□□ 1.27
PTP4A3-203ENST00000520105 B3GAT3O94766 335 aa22.99■■□□□ 1.27
PTP4A3-203ENST00000520105 CALCAP01258 141 aa22.99■■□□□ 1.27
PTP4A3-203ENST00000520105 TDRD12Q587J7 1177 aaKnown RBP22.99■■□□□ 1.27
PTP4A3-203ENST00000520105 TMEM240Q5SV17 173 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms