RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 C15orf38-AP3S2A0A0A6YYH1 394 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 NPHP3-ACAD11A0A0J9YXS1 232 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 TTC34A8MYJ7 566 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 UBE2Q2LH0YL09 131 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 DKC1O60832 514 aaKnown RBP eCLIP12.02□□□□□ -0.48
SPIDR-211ENST00000519401 SPAG7O75391 227 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 GGPS1O95749 300 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 CREB1P16220 341 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 PLCG2P16885 1265 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 FGFR4P22455 802 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 PGM1P36871 562 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 CCR3P51677 355 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 LRRC63Q05C16 580 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.48
SPIDR-211ENST00000519401 KRT81Q14533 505 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 METTL21CQ5VZV1 264 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 KYAT3Q6YP21 454 aaKnown RBP12.02□□□□□ -0.48
SPIDR-211ENST00000519401 ARPINQ7Z6K5 226 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 TBC1D10CQ8IV04 446 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 OSBPL8Q9BZF1 889 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 Q9H521 79 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 CNNM2Q9H8M5 875 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 TAS2R1Q9NYW7 299 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 AMFRQ9UKV5 643 aa12.02□□□□□ -0.48
SPIDR-211ENST00000519401 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.02□□□□□ -0.48
SPIDR-211ENST00000519401 TMEM114B3SHH9 223 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 TNFAIP8O95379 198 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 CD48P09326 243 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 CDH2P19022 906 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-211ENST00000519401 ADORA1P30542 326 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 RPL21P46778 160 aaKnown RBP12.02□□□□□ -0.49
SPIDR-211ENST00000519401 WDR4P57081 412 aaKnown RBP12.02□□□□□ -0.49
SPIDR-211ENST00000519401 TUBA1BP68363 451 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 KLHL30Q0D2K2 578 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 APOFQ13790 326 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 SEPT7Q16181 437 aaKnown RBP12.02□□□□□ -0.49
SPIDR-211ENST00000519401 LONRF1Q17RB8 773 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 TRIM71Q2Q1W2 868 aaKnown RBP12.02□□□□□ -0.49
SPIDR-211ENST00000519401 MMEL1Q495T6 779 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 NAALADL2Q58DX5 795 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 CNNM4Q6P4Q7 775 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 CCDC62Q6P9F0 684 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 TUBA1AQ71U36 451 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 EPM2AIP1Q7L775 607 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-211ENST00000519401 DHDDSQ86SQ9 333 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 TMPRSS6Q8IU80 811 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 CCDC110Q8TBZ0 833 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 DENND1AQ8TEH3 1009 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 BORCS5Q969J3 196 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 PACSIN1Q9BY11 444 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 CCSER1Q9C0I3 900 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 NDEL1Q9GZM8 345 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 NENFQ9UMX5 172 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 SMG5Q9UPR3 1016 aaKnown RBP12.02□□□□□ -0.49
SPIDR-211ENST00000519401 CHD4Q14839 1912 aa12.02□□□□□ -0.49
SPIDR-211ENST00000519401 CCDC160A6NGH7 325 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 PCSK6P29122 969 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 RXRGP48443 463 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 CDK9P50750 372 aaKnown RBP12.01□□□□□ -0.49
SPIDR-211ENST00000519401 DMPKQ09013 629 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 ALX1Q15699 326 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 ASIC2Q16515 512 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 MYLK3Q32MK0 819 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 DCDC5Q6ZRR9 648 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 MTDHQ86UE4 582 aaKnown RBP12.01□□□□□ -0.49
SPIDR-211ENST00000519401 SLC51AQ86UW1 340 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 METTL25Q8N6Q8 603 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 RIN3Q8TB24 985 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 FAM89AQ96GI7 184 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 CCDC85AQ96PX6 553 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-211ENST00000519401 PUS7LQ9H0K6 701 aaKnown RBP12.01□□□□□ -0.49
SPIDR-211ENST00000519401 PIH1D3Q9NQM4 214 aaKnown RBP12.01□□□□□ -0.49
SPIDR-211ENST00000519401 SENP1Q9P0U3 644 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 NOX1Q9Y5S8 564 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 GPAA1O43292 621 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 DGKIO75912 1065 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 NOL4O94818 638 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 PGM3O95394 542 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 ESRRBO95718 433 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 OCM2P0CE71 109 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 OCMP0CE72 109 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-211ENST00000519401 CDH3P22223 829 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 AMPD1P23109 780 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 HOXD10P28358 340 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 GNA11P29992 359 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 EPS15P42566 896 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 VCPP55072 806 aaKnown RBP12.01□□□□□ -0.49
SPIDR-211ENST00000519401 RHBDL3P58872 404 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 FKBP4Q02790 459 aaKnown RBP eCLIP12.01□□□□□ -0.49
SPIDR-211ENST00000519401 DNAJC3Q13217 504 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 SCARF1Q14162 830 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 ZNF174Q15697 407 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 POTEHQ6S545 545 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 ZNF804AQ7Z570 1209 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 WDR75Q8IWA0 830 aaKnown RBP12.01□□□□□ -0.49
SPIDR-211ENST00000519401 CHPT1Q8WUD6 406 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 C7orf25Q9BPX7 421 aa12.01□□□□□ -0.49
SPIDR-211ENST00000519401 CDC42EP4Q9H3Q1 356 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms