RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 ZNF267Q14586 743 aaPredicted RBP4.82□□□□□ -1.64
SKP1-205ENST00000519054 CCDC157Q569K6 752 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 IFIT1BQ5T764 474 aaKnown RBP4.82□□□□□ -1.64
SKP1-205ENST00000519054 PCSK4Q6UW60 755 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 SLC44A3Q8N4M1 653 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 PDPRQ8NCN5 879 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 NSUN7Q8NE18 718 aaKnown RBP4.82□□□□□ -1.64
SKP1-205ENST00000519054 SUPT20HQ8NEM7 779 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 CAVIN3Q969G5 261 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 AGAP2Q99490 1192 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 BRD9Q9H8M2 597 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 LMBRD1Q9NUN5 540 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 TMEM74BQ9NUR3 256 aa4.82□□□□□ -1.64
SKP1-205ENST00000519054 SIDT1Q9NXL6 827 aaKnown RBP4.82□□□□□ -1.64
SKP1-205ENST00000519054 VSX1Q9NZR4 365 aaPredicted RBP4.82□□□□□ -1.64
SKP1-205ENST00000519054 E2F8A0AVK6 867 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 AP1G1O43747 822 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 OFD1O75665 1012 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 ARIH2O95376 493 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 GJB1P08034 283 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 HKR1P10072 659 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 FDXRP22570 491 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 PRDX5P30044 214 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 CYP2C19P33261 490 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 AVPR1BP47901 424 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 VAV2P52735 878 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 EPHB1P54762 984 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 TAP1Q03518 808 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 ZNF844Q08AG5 666 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 PLEKHG6Q3KR16 790 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 TPH2Q8IWU9 490 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 RAVER1Q8IY67 606 aaKnown RBP4.81□□□□□ -1.64
SKP1-205ENST00000519054 Q8NA96 180 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 GPR150Q8NGU9 434 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 TNPO1Q92973 898 aaKnown RBP4.81□□□□□ -1.64
SKP1-205ENST00000519054 HPS3Q969F9 1004 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 TMEM125Q96AQ2 219 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 PTCD3Q96EY7 689 aaKnown RBP4.81□□□□□ -1.64
SKP1-205ENST00000519054 LRGUKQ96M69 825 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 Q96MF0 132 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 MAP3K14Q99558 947 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 SLITRK6Q9H5Y7 841 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 UNKLQ9H9P5 680 aaKnown RBP4.81□□□□□ -1.64
SKP1-205ENST00000519054 CASS4Q9NQ75 786 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 KMT5AQ9NQR1 393 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 GNL3LQ9NVN8 582 aaKnown RBP4.81□□□□□ -1.64
SKP1-205ENST00000519054 TBCCD1Q9NVR7 557 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 SYBUQ9NX95 663 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 ZIM2Q9NZV7 527 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 FEZ2Q9UHY8 353 aaPredicted RBP4.81□□□□□ -1.64
SKP1-205ENST00000519054 PACSIN3Q9UKS6 424 aa4.81□□□□□ -1.64
SKP1-205ENST00000519054 THRAP3Q9Y2W1 955 aaKnown RBP4.81□□□□□ -1.64
SKP1-205ENST00000519054 EPN1Q9Y6I3 576 aaPredicted RBP4.81□□□□□ -1.64
SKP1-205ENST00000519054 TRGV11A0A075B6L2 103 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 MYADML2A6NDP7 307 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 ZNF785A8K8V0 405 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 E9PLN8 166 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 FTH1P19P0C7X4 201 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 TYRP14679 529 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 KCNA2P16389 499 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 PROZP22891 400 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 PIK3CGP48736 1102 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 MC2RQ01718 297 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 ATAT1Q5SQI0 421 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 FAM90A1Q86YD7 464 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 COLGALT2Q8IYK4 626 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 CFAP52Q8N1V2 620 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 LINC00476Q8WZB0 136 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 VKORC1Q9BQB6 163 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 CDH19Q9H159 772 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 SLC12A5Q9H2X9 1139 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 TOR3AQ9H497 397 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 WDCPQ9H6R7 721 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 CTTNBP2NLQ9P2B4 639 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 CFAP97Q9P2B7 532 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 PNMA8BQ9ULN7 279 aaPredicted RBP4.8□□□□□ -1.64
SKP1-205ENST00000519054 NR2E3Q9Y5X4 410 aa4.8□□□□□ -1.64
SKP1-205ENST00000519054 CCDC195A0A1B0GUA6 201 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 PRSS29PA6NIE9 313 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 H3BUI4 141 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 TOR1BO14657 336 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 RHOBTB3O94955 611 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 AHSGP02765 367 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 ANXA1P04083 346 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 S100BP04271 92 aaPredicted RBP4.79□□□□□ -1.64
SKP1-205ENST00000519054 ALDH2P05091 517 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 TGM1P22735 817 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 ZNF135P52742 658 aaPredicted RBP4.79□□□□□ -1.64
SKP1-205ENST00000519054 SEC24CP53992 1094 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 BLOC1S1P78537 153 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 COL10A1Q03692 680 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 PIGFQ07326 219 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 FOXI1Q12951 378 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 CD300EQ496F6 205 aaPredicted RBP4.79□□□□□ -1.64
SKP1-205ENST00000519054 CRB2Q5IJ48 1285 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 TAPT1Q6NXT6 567 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 CLNKQ7Z7G1 428 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 PPP1R3BQ86XI6 285 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 PDSS2Q86YH6 399 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 CAMKK1Q8N5S9 505 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms