RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 KIAA0319Q5VV43 1072 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 CENPPQ6IPU0 288 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 RSPO2Q6UXX9 243 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 TRAPPC11Q7Z392 1133 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 USP37Q86T82 979 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 WDR49Q8IV35 697 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 ELOA2Q8IYF1 753 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 DHTKD1Q96HY7 919 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 MFSD14AQ96MC6 490 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 ZNF560Q96MR9 790 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 PGLYRP2Q96PD5 576 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 TMEM209Q96SK2 561 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 PI4K2AQ9BTU6 479 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 UBE2ZQ9H832 354 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 NXF1Q9UBU9 619 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 POLIQ9UNA4 740 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 SNX9Q9Y5X1 595 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 HCFC2Q9Y5Z7 792 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 CDY1Q9Y6F8 540 aa13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 ZNF638Q14966 1978 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-211ENST00000518910 TMEM189-UBE2V1I3L0A0 370 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 PIRO00625 290 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 CST3P01034 146 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 CPB1P15086 417 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 POU3F3P20264 500 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 CYP3A5P20815 502 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 FGFR3P22607 806 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 ACAT1P24752 427 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 OR1D2P34982 312 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 RAP1GAPP47736 663 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 MYL6P60660 151 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 ELAVL2Q12926 359 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 SURF1Q15526 300 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 SV2CQ496J9 727 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 TDRD10Q5VZ19 366 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 WSCD1Q658N2 575 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 SPOPLQ6IQ16 392 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 TTI2Q6NXR4 508 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 SLC9A9Q8IVB4 645 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 RNF168Q8IYW5 571 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 LNX1Q8TBB1 728 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 PARD3BQ8TEW8 1205 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 HLA-CQ95604 372 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 HPDLQ96IR7 371 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 SUSD3Q96L08 255 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 MMS19Q96T76 1030 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 SRRTQ9BXP5 876 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 ITGA11Q9UKX5 1188 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
CTNNA1-211ENST00000518910 ANO9A1A5B4 782 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 BICDL2A1A5D9 508 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 LRRN2O75325 713 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 ADH1AP07327 375 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 ODC1P11926 461 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 RBP5P82980 135 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 FKBP3Q00688 224 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 YWHAHQ04917 246 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 PPP3CAQ08209 521 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 CCDC142Q17RM4 750 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 EDRF1Q3B7T1 1238 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 C1orf220Q5T0J3 134 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 PDE12Q6L8Q7 609 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 TMC5Q6UXY8 1006 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 TRIML1Q8N9V2 468 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 CHST7Q9NS84 486 aa13.19□□□□□ -0.3
CTNNA1-211ENST00000518910 PTPRDP23468 1912 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 MYO10Q9HD67 2058 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 CARNS1A5YM72 827 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 LILRB3O75022 631 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 RFPL2O75678 378 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 VNN1O95497 513 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 EFEMP2O95967 443 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 GLUD1P00367 558 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 HLA-DRAP01903 254 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 LTBRP36941 435 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 LRRC63Q05C16 580 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 LRMPQ12912 555 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 ORC1Q13415 861 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 ADAM15Q13444 863 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 NCOA4Q13772 614 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 ZNF699Q32M78 642 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 OVOS1Q6IE37 1185 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 METTL23Q86XA0 190 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 EFHBQ8N7U6 833 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 PABPC5Q96DU9 382 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 FBXL5Q9UKA1 691 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 L1RE1Q9UN81 338 aa13.18□□□□□ -0.3
CTNNA1-211ENST00000518910 UNC80Q8N2C7 3258 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 TGM5O43548 720 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 HUS1O60921 280 aa13.17□□□□□ -0.3
CTNNA1-211ENST00000518910 SOAT2O75908 522 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms