RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 EFCAB13Q8IY85 973 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 PARD3BQ8TEW8 1205 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 EEF2KMTQ96G04 330 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 GAS2L1Q99501 681 aaPredicted RBP8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 DUSP9Q99956 384 aaKnown RBP8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 SRRTQ9BXP5 876 aaKnown RBP8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 LMAN2LQ9H0V9 348 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 GOLGA2P5Q9HBQ8 144 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ALG13Q9NP73 1137 aaKnown RBP8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 INTS13Q9NVM9 706 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TUBGCP4Q9UGJ1 667 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ARMCX3Q9UH62 379 aaPredicted RBP8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ADAM28Q9UKQ2 775 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ITGA11Q9UKX5 1188 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 LZTS1Q9Y250 596 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 NUB1Q9Y5A7 615 aa8.3□□□□□ -1.08
CSGALNACT1-206ENST00000518542 SF3B1O75533 1304 aaKnown RBP eCLIP8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 SCN1AP35498 2009 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 LRRIQ3A6PVS8 624 aaPredicted RBP8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TMEM189-UBE2V1I3L0A0 370 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 LPXNO60711 386 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 PHACTR2O75167 634 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 KRT19P08727 400 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 PNPLA4P41247 253 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 WNT7BP56706 349 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 RBP5P82980 135 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 BIRC3Q13489 604 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TRPC3Q13507 836 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 GRIN2CQ14957 1233 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TCERG1LQ5VWI1 586 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 LMBRD2Q68DH5 695 aaPredicted RBP8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 PDE12Q6L8Q7 609 aaKnown RBP8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 SPRED2Q7Z698 418 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 CREBRFQ8IUR6 639 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 VPS52Q8N1B4 723 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 SPPL3Q8TCT6 385 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 MICAL1Q8TDZ2 1067 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 GDPD5Q8WTR4 605 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 POF1BQ8WVV4 589 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 RABGGTAQ92696 567 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TRIM44Q96DX7 344 aaPredicted RBP8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ZNF560Q96MR9 790 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 POP1Q99575 1024 aaKnown RBP8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 PAAF1Q9BRP4 392 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 MTMR12Q9C0I1 747 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 DNAJC25Q9H1X3 360 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 PRDM12Q9H4Q4 367 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 THAP9Q9H5L6 903 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TLR9Q9NR96 1032 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 MARCH5Q9NX47 278 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 LMCD1Q9NZU5 365 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 MAGEC2Q9UBF1 373 aaPredicted RBP8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 CACNG4Q9UBN1 327 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 SSX2IPQ9Y2D8 614 aa8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 COL4A4P53420 1690 aaPredicted RBP8.29□□□□□ -1.08
CSGALNACT1-206ENST00000518542 CHD9Q3L8U1 2897 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ANO9A1A5B4 782 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ARHGEF37A1IGU5 675 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 EPOPA6NHQ4 379 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TNFRSF10AO00220 468 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 RFXAPO00287 272 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 PIRO00625 290 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 GRM6O15303 877 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 CLSTN1O94985 981 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 KIF4AO95239 1232 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 CAVIN2O95810 425 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 SOD2P04179 222 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ITGB3P05106 788 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 POLR2BP30876 1174 aaKnown RBP8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 GTF2H1P32780 548 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TAF6P49848 677 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 GUCY2FP51841 1108 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 DLG4P78352 724 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 CLDN10P78369 228 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 MYO1EQ12965 1108 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 USP41Q3LFD5 358 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 SV2CQ496J9 727 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ANO6Q4KMQ2 910 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 DCAF17Q5H9S7 520 aaPredicted RBP8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TJAP1Q5JTD0 557 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 C9orf57Q5W0N0 161 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 KIAA1841Q6NSI8 718 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 FUT10Q6P4F1 479 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 LRSAM1Q6UWE0 723 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 C11orf57Q6ZUT1 292 aaPredicted RBP8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TRAPPC11Q7Z392 1133 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TMC7Q7Z402 723 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 TMEM173Q86WV6 379 aaPredicted RBP8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 LRRC52Q8N7C0 313 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 C1orf127Q8N9H9 656 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 OR5B17Q8NGF7 314 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ENOX1Q8TC92 643 aaKnown RBP8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 HASPINQ8TF76 798 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 PPP2R3CQ969Q6 453 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 MRPL38Q96DV4 380 aaKnown RBP8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 NGRNQ9NPE2 291 aaKnown RBP8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 ENTPD7Q9NQZ7 604 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 AGAP1Q9UPQ3 857 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 NFE2L3Q9Y4A8 694 aa8.28□□□□□ -1.08
CSGALNACT1-206ENST00000518542 BDP1A6H8Y1 2624 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms