RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 RAB39AQ14964 217 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 KHDC1Q4VXA5 237 aaKnown RBP4.83□□□□□ -1.64
PABPC1-206ENST00000518293 TSHZ3Q63HK5 1081 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 TTC7BQ86TV6 843 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 RHOT2Q8IXI1 618 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 FAM193BQ96PV7 902 aaPredicted RBP4.83□□□□□ -1.64
PABPC1-206ENST00000518293 NUP88Q99567 741 aaPredicted RBP4.83□□□□□ -1.64
PABPC1-206ENST00000518293 SLC46A2Q9BY10 475 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 CDH19Q9H159 772 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 KLHL11Q9NVR0 708 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 ZIM2Q9NZV7 527 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 CALCOCO1Q9P1Z2 691 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 ZNF180Q9UJW8 692 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 LTBP4Q8N2S1 1624 aa4.83□□□□□ -1.64
PABPC1-206ENST00000518293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.82□□□□□ -1.64
PABPC1-206ENST00000518293 PRXQ9BXM0 1461 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 PLCH2O75038 1416 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 E2F8A0AVK6 867 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 CCDC78A2IDD5 438 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 NCR1O76036 304 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 MALP21145 153 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 GCSHP23434 173 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 SNAPC2Q13487 334 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 GADL1Q6ZQY3 521 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 RHOUQ7L0Q8 258 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 ZNF627Q7L945 461 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 MRGPREQ86SM8 312 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 TPH2Q8IWU9 490 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 IL17RDQ8NFM7 739 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 OR56A1Q8NGH5 318 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 CAMKK2Q96RR4 588 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 NRDE2Q9H7Z3 1164 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 AKIP1Q9NQ31 210 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 DKK2Q9UBU2 259 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 FZD1Q9UP38 647 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 REREQ9P2R6 1566 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 AGLP35573 1532 aa4.82□□□□□ -1.64
PABPC1-206ENST00000518293 NUP153P49790 1475 aaKnown RBP4.81□□□□□ -1.64
PABPC1-206ENST00000518293 NPATQ14207 1427 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 NCOA1Q15788 1441 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 MROH2AA6NES4 1674 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 NT5C1B-RDH14C9J2C7 533 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 RNASET2O00584 256 aaKnown RBP4.81□□□□□ -1.64
PABPC1-206ENST00000518293 S100BP04271 92 aaPredicted RBP4.81□□□□□ -1.64
PABPC1-206ENST00000518293 RPLP2P05387 115 aaKnown RBP4.81□□□□□ -1.64
PABPC1-206ENST00000518293 CD1AP06126 327 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 ELANEP08246 267 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 CT47B1P0C2W7 299 aaPredicted RBP4.81□□□□□ -1.64
PABPC1-206ENST00000518293 ALAS1P13196 640 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 VCAM1P19320 739 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 NOMO3P69849 1222 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 LRRC41Q15345 812 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 ATP2B3Q16720 1220 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 BEAN1Q3B7T3 259 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 FLYWCH1Q4VC44 716 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 PABPC1LQ4VXU2 614 aaKnown RBP4.81□□□□□ -1.64
PABPC1-206ENST00000518293 NOMO2Q5JPE7 1267 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 ATAT1Q5SQI0 421 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 LRRC55Q6ZSA7 311 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 C3orf20Q8ND61 904 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 HAS1Q92839 578 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 HPS3Q969F9 1004 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 LENG9Q96B70 501 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 MVB12AQ96EY5 273 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 AGAP2Q99490 1192 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 SLC12A5Q9H2X9 1139 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 PNMA8BQ9ULN7 279 aaPredicted RBP4.81□□□□□ -1.64
PABPC1-206ENST00000518293 ATP11BQ9Y2G3 1177 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 DMRT1Q9Y5R6 373 aa4.81□□□□□ -1.64
PABPC1-206ENST00000518293 CLIP1P30622 1438 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 SIGLEC1Q9BZZ2 1709 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 CAMSAP1Q5T5Y3 1602 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 MED1Q15648 1581 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-206ENST00000518293 A0A1B0GTW7 788 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 GAGE12BA1L429 117 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 CDHR4A6H8M9 788 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 GAGE12HA6NDE8 117 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 F2RL2O00254 374 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 LPXNO60711 386 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 SLC43A1O75387 559 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 RFPL1O75677 317 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 NDUFA10O95299 355 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 MTHFD1P11586 935 aaKnown RBP4.8□□□□□ -1.64
PABPC1-206ENST00000518293 CKBP12277 381 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 LAG3P18627 525 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 PTGS2P35354 604 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 MAP2K6P52564 334 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 ZNF267Q14586 743 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-206ENST00000518293 NFE2Q16621 373 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-206ENST00000518293 PGS1Q32NB8 556 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 MAPKAPK5Q8IW41 473 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 ULK2Q8IYT8 1036 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 FITM2Q8N6M3 262 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 NLGN4YQ8NFZ3 816 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-206ENST00000518293 TBC1D15Q8TC07 691 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 MYEOVQ96EZ4 313 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 MARS2Q96GW9 593 aaKnown RBP4.8□□□□□ -1.64
PABPC1-206ENST00000518293 ZSWIM1Q9BR11 485 aa4.8□□□□□ -1.64
PABPC1-206ENST00000518293 TTPALQ9BTX7 342 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms