RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 XYLBO75191 536 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 COL9A1P20849 921 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 NUCB2P80303 420 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 ARMCX5Q6P1M9 558 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 TRIM67Q6ZTA4 783 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 UBALD2Q8IYN6 164 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 GPD1LQ8N335 351 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 ZSWIM2Q8NEG5 633 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 SLC7A14Q8TBB6 771 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 SCFD1Q8WVM8 642 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 SAAL1Q96ER3 474 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 BLZF1Q9H2G9 400 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 KIAA1586Q9HCI6 787 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 DPP3Q9NY33 737 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.66■■□□□ 1.863e-7■■■□□ 18.1
PVT1-204ENST00000517525 SORCS3Q9UPU3 1222 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 C2orf16Q68DN1 1984 aa26.66■■□□□ 1.86
PVT1-204ENST00000517525 TECTAO75443 2155 aa26.65■■□□□ 1.86
PVT1-204ENST00000517525 FAM86C2PA6NEL3 165 aa26.65■■□□□ 1.86
PVT1-204ENST00000517525 KLRC4O43908 158 aa26.65■■□□□ 1.86
PVT1-204ENST00000517525 CYP11A1P05108 521 aa26.65■■□□□ 1.86
PVT1-204ENST00000517525 SP100P23497 879 aaPredicted RBP26.65■■□□□ 1.86
PVT1-204ENST00000517525 AFMP43652 599 aa26.65■■□□□ 1.86
PVT1-204ENST00000517525 YWHAHQ04917 246 aaPredicted RBP26.65■■□□□ 1.86
PVT1-204ENST00000517525 RBAKQ9NYW8 714 aaPredicted RBP26.65■■□□□ 1.86
PVT1-204ENST00000517525 CGNQ9P2M7 1197 aaKnown RBP26.65■■□□□ 1.86
PVT1-204ENST00000517525 LIMD1Q9UGP4 676 aa26.65■■□□□ 1.86
PVT1-204ENST00000517525 AFF4Q9UHB7 1163 aaKnown RBP26.65■■□□□ 1.86
PVT1-204ENST00000517525 ZFP37Q9Y6Q3 630 aaPredicted RBP26.65■■□□□ 1.86
PVT1-204ENST00000517525 OR6C75A6NL08 312 aa26.64■■□□□ 1.86
PVT1-204ENST00000517525 SPTLC1O15269 473 aa26.64■■□□□ 1.86
PVT1-204ENST00000517525 TGFB1I1O43294 461 aa26.64■■□□□ 1.86
PVT1-204ENST00000517525 N4BP1O75113 896 aaKnown RBP26.64■■□□□ 1.86
PVT1-204ENST00000517525 CASP1P29466 404 aa26.64■■□□□ 1.86
PVT1-204ENST00000517525 SIGLEC14Q08ET2 396 aa26.64■■□□□ 1.86
PVT1-204ENST00000517525 DSTYKQ6XUX3 929 aa26.64■■□□□ 1.86
PVT1-204ENST00000517525 CACTINQ8WUQ7 758 aaKnown RBP26.64■■□□□ 1.86
PVT1-204ENST00000517525 SENP8Q96LD8 212 aa26.64■■□□□ 1.86
PVT1-204ENST00000517525 AVENQ9NQS1 362 aaPredicted RBP26.64■■□□□ 1.86
PVT1-204ENST00000517525 SYKP43405 635 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 WNT7BP56706 349 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 PSMD2Q13200 908 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 MYBPC2Q14324 1141 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 USP37Q86T82 979 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 C12orf56Q8IXR9 622 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 TMEM174Q8WUU8 243 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 NXPE3Q969Y0 559 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 BORCS6Q96GS4 357 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 IGSF9Q9P2J2 1179 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 DSEQ9UL01 958 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 ANK1P16157 1881 aa26.63■■□□□ 1.85
PVT1-204ENST00000517525 ZNF233A6NK53 670 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 ODC1P11926 461 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 ELF1P32519 619 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 PNPLA4P41247 253 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 TAF6P49848 677 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 MTMR3Q13615 1198 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 SURF1Q15526 300 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 GRAMD1CQ8IYS0 662 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 CXorf38Q8TB03 319 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 PCIF1Q9H4Z3 704 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 AGPAT3Q9NRZ7 376 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 HSPBP1Q9NZL4 362 aa26.62■■□□□ 1.85
PVT1-204ENST00000517525 ARIH1Q9Y4X5 557 aaPredicted RBP26.62■■□□□ 1.85
PVT1-204ENST00000517525 GOLGA8IPA6NC78 632 aa26.61■■□□□ 1.85
PVT1-204ENST00000517525 GOLGA8JA6NMD2 632 aa26.61■■□□□ 1.85
PVT1-204ENST00000517525 NDUFA8P51970 172 aa26.61■■□□□ 1.85
PVT1-204ENST00000517525 OVOS1Q6IE37 1185 aa26.61■■□□□ 1.85
PVT1-204ENST00000517525 GRASPQ7Z6J2 395 aaPredicted RBP26.61■■□□□ 1.85
PVT1-204ENST00000517525 MYADMQ96S97 322 aa26.61■■□□□ 1.85
PVT1-204ENST00000517525 TMEM221A6NGB7 291 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 M0R296 226 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 CCL16O15467 120 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 FSHRP23945 695 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 GPR17Q13304 367 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 KNOP1Q1ED39 458 aaKnown RBP26.6■■□□□ 1.85
PVT1-204ENST00000517525 HS2ST1Q7LGA3 356 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 LRRC52Q8N7C0 313 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 C1orf127Q8N9H9 656 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 ASIC4Q96FT7 647 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 ZNF560Q96MR9 790 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 PDE11AQ9HCR9 933 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 SLC39A2Q9NP94 309 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 RAPGEFL1Q9UHV5 662 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 ITGA11Q9UKX5 1188 aa26.6■■□□□ 1.85
PVT1-204ENST00000517525 TIMM13Q9Y5L4 95 aaPredicted RBP26.6■■□□□ 1.85
PVT1-204ENST00000517525 MYO10Q9HD67 2058 aa26.59■■□□□ 1.85
PVT1-204ENST00000517525 SEC24AO95486 1093 aa26.59■■□□□ 1.85
PVT1-204ENST00000517525 LAMP2P13473 410 aa26.59■■□□□ 1.85
PVT1-204ENST00000517525 GBP2P32456 591 aaPredicted RBP26.59■■□□□ 1.85
PVT1-204ENST00000517525 TFAMQ00059 246 aaKnown RBP26.59■■□□□ 1.85
PVT1-204ENST00000517525 SV2CQ496J9 727 aa26.59■■□□□ 1.85
PVT1-204ENST00000517525 CBWD2Q8IUF1 395 aa26.59■■□□□ 1.85
PVT1-204ENST00000517525 GOLGA5Q8TBA6 731 aa26.59■■□□□ 1.85
PVT1-204ENST00000517525 KCNK12Q9HB15 430 aa26.59■■□□□ 1.85
PVT1-204ENST00000517525 CYP4F11Q9HBI6 524 aa26.59■■□□□ 1.85
PVT1-204ENST00000517525 DNMT3BQ9UBC3 853 aaKnown RBP26.59■■□□□ 1.85
PVT1-204ENST00000517525 HSFX1Q9UBD0 423 aa26.59■■□□□ 1.85
PVT1-204ENST00000517525 KPNA7A9QM74 516 aa26.58■■□□□ 1.85
PVT1-204ENST00000517525 ANHXE9PGG2 379 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms