RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 LILRB3O75022 631 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 CSPG5O95196 566 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 STAU1O95793 577 aaKnown RBP12.82□□□□□ -0.36
SNF8-215ENST00000515572 C4BPAP04003 597 aaKnown RBP12.82□□□□□ -0.36
SNF8-215ENST00000515572 ODC1P11926 461 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 ATICP31939 592 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 CA8P35219 290 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 BIRC3Q13489 604 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 PTPN14Q15678 1187 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 DCAF17Q5H9S7 520 aaPredicted RBP12.82□□□□□ -0.36
SNF8-215ENST00000515572 C1orf220Q5T0J3 134 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 TDRD10Q5VZ19 366 aaKnown RBP12.82□□□□□ -0.36
SNF8-215ENST00000515572 C15orf39Q6ZRI6 1047 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 ANKS3Q6ZW76 656 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 SV2AQ7L0J3 742 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 CEP57Q86XR8 500 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 FAM114A1Q8IWE2 563 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
SNF8-215ENST00000515572 HPDLQ96IR7 371 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 MED15Q96RN5 788 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 OXCT2Q9BYC2 517 aaPredicted RBP12.82□□□□□ -0.36
SNF8-215ENST00000515572 NAT10Q9H0A0 1025 aaKnown RBP12.82□□□□□ -0.36
SNF8-215ENST00000515572 THAP9Q9H5L6 903 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 TMEM8AQ9HCN3 771 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 GDAP2Q9NXN4 497 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 DSEQ9UL01 958 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 HIDE1A8MVS5 230 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 H7C4K7 107 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 I3L4J1 428 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 C2CD2LO14523 706 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 SPTLC1O15269 473 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 ADH1AP07327 375 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 TRIM49P0CI25 452 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 TRIM49CP0CI26 452 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 TYMPP19971 482 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 IGFBP6P24592 240 aaPredicted RBP12.81□□□□□ -0.36
SNF8-215ENST00000515572 TKTP29401 623 aaKnown RBP12.81□□□□□ -0.36
SNF8-215ENST00000515572 PPP3CAQ08209 521 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 NCOA4Q13772 614 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 PSMD5Q16401 504 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 DUSP6Q16828 381 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 TCEAL5Q5H9L2 206 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 RTP2Q5QGT7 225 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 TCERG1LQ5VWI1 586 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 KRT39Q6A163 491 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 PPFIBP1Q86W92 1011 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 TMEM130Q8N3G9 435 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 LNX1Q8TBB1 728 aaPredicted RBP12.81□□□□□ -0.36
SNF8-215ENST00000515572 ENOX1Q8TC92 643 aaKnown RBP12.81□□□□□ -0.36
SNF8-215ENST00000515572 TAF4BQ92750 862 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 SLC35C1Q96A29 364 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 B3GALT6Q96L58 329 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 SENP8Q96LD8 212 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 TLE6Q9H808 572 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 RXFP1Q9HBX9 757 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 FNIP2Q9P278 1114 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 MTRRQ9UBK8 725 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 PCDHGC5Q9Y5F6 944 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 BACE2Q9Y5Z0 518 aa12.81□□□□□ -0.36
SNF8-215ENST00000515572 SYCE3A1L190 88 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 CYB561D2O14569 222 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 OAZ2O95190 189 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 C1RP00736 705 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 CST3P01034 146 aaPredicted RBP12.8□□□□□ -0.36
SNF8-215ENST00000515572 CYP11A1P05108 521 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 GCLMP48507 274 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 NRIP1P48552 1158 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 NDUFV1P49821 464 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 MXI1P50539 228 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 YWHAHQ04917 246 aaPredicted RBP12.8□□□□□ -0.36
SNF8-215ENST00000515572 HYAL1Q12794 435 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 MRPL58Q14197 206 aaKnown RBP12.8□□□□□ -0.36
SNF8-215ENST00000515572 SGSM1Q2NKQ1 1148 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
SNF8-215ENST00000515572 C11orf57Q6ZUT1 292 aaPredicted RBP12.8□□□□□ -0.36
SNF8-215ENST00000515572 DPH6Q7L8W6 267 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 ADGRD2Q7Z7M1 963 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 METTL23Q86XA0 190 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 TRIM59Q8IWR1 403 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 MICALL1Q8N3F8 863 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 MAFAQ8NHW3 353 aaPredicted RBP12.8□□□□□ -0.36
SNF8-215ENST00000515572 SPATA18Q8TC71 538 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 AUTS2Q8WXX7 1259 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 FAM84AQ96KN4 292 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 IMPG2Q9BZV3 1241 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 DNAJC25Q9H1X3 360 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 VRTNQ9H8Y1 702 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 MAGEC2Q9UBF1 373 aaPredicted RBP12.8□□□□□ -0.36
SNF8-215ENST00000515572 NFE2L3Q9Y4A8 694 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNF8-215ENST00000515572 PLXNA3P51805 1871 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
SNF8-215ENST00000515572 MYO7AQ13402 2215 aa12.8□□□□□ -0.36
SNF8-215ENST00000515572 PMM2O15305 246 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 HUS1O60921 280 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 N4BP1O75113 896 aaKnown RBP12.79□□□□□ -0.36
SNF8-215ENST00000515572 VNN1O95497 513 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 CAVIN2O95810 425 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 CNPP09543 421 aaKnown RBP12.79□□□□□ -0.36
SNF8-215ENST00000515572 FAM163BP0C2L3 166 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms