RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PRRG1O14668 218 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 SPTLC1O15269 473 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 GCNT3O95395 438 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 VNN2O95498 520 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 PDIA4P13667 645 aaKnown RBP11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 CPB1P15086 417 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 AOC1P19801 751 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 PAX3P23760 479 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 ELF1P32519 619 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 LILRA4P59901 499 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 ALCAMQ13740 583 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 PRSS36Q5K4E3 855 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 C9orf57Q5W0N0 161 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 PARM1Q6UWI2 310 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 RNF19BQ6ZMZ0 732 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 PDILTQ8N807 584 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 GPR152Q8TDT2 470 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 POMGNT1Q8WZA1 660 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 FAM212AQ96EL1 285 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 ACCSQ96QU6 501 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 PANK2Q9BZ23 570 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 TNMDQ9H2S6 317 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 TBC1D7Q9P0N9 293 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 EXOC7Q9UPT5 735 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 TIMM13Q9Y5L4 95 aaPredicted RBP11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 DOCK8Q8NF50 2099 aa11.34□□□□□ -0.59
HMGXB3-205ENST00000514469 OR6C75A6NL08 312 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 CUTAO60888 179 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 IL18RAPO95256 599 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 F13A1P00488 732 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 ZSCAN22P10073 491 aaPredicted RBP11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 ODC1P11926 461 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 IDEP14735 1019 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 CEBPBP17676 345 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 PTPN2P17706 415 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 MRE11P49959 708 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 ADCY1Q08828 1119 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 POSTNQ15063 836 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 OVOS1Q6IE37 1185 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 POTEHQ6S545 545 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 DSTYKQ6XUX3 929 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 USP37Q86T82 979 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 ALYREFQ86V81 257 aaKnown RBP11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 EFCAB13Q8IY85 973 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 FLCNQ8NFG4 579 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 ST13P5Q8NFI4 369 aaPredicted RBP11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 ING5Q8WYH8 240 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 SENP8Q96LD8 212 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 PHOX2BQ99453 314 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 RPP25Q9BUL9 199 aaKnown RBP11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 CUEDC2Q9H467 287 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 ARHGEF3Q9NR81 526 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 KBTBD4Q9NVX7 518 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 GDE1Q9NZC3 331 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 TFIP11Q9UBB9 837 aaKnown RBP11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 MRPS23Q9Y3D9 190 aaKnown RBP11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 YIPF1Q9Y548 306 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 ANK1P16157 1881 aa11.33□□□□□ -0.6
HMGXB3-205ENST00000514469 NOTCH4Q99466 2003 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 PI15O43692 258 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 MICAL2O94851 1124 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 CYP11A1P05108 521 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 OR4Q2P0C623 313 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 GARTP22102 1010 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 EPHA5P54756 1037 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 WNT7BP56706 349 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 TWF1Q12792 350 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 GPR17Q13304 367 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 MYBPC2Q14324 1141 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 CNNM4Q6P4Q7 775 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 SHC4Q6S5L8 630 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 NT5DC4Q86YG4 428 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 BRSK2Q8IWQ3 736 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 CCDC105Q8IYK2 499 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 ZSWIM2Q8NEG5 633 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 RTP3Q9BQQ7 232 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 CORO1BQ9BR76 489 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 FAM213AQ9BRX8 229 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 TRIM9Q9C026 710 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 LRRC27Q9C0I9 530 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 IRF2BPLQ9H1B7 796 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 DPP3Q9NY33 737 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 CEP72Q9P209 647 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
HMGXB3-205ENST00000514469 ZDBF2Q9HCK1 2354 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 MTMR11A4FU01 709 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 NRG2O14511 850 aaPredicted RBP11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 ECI2O75521 394 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 HSP90AA1P07900 732 aaKnown RBP11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 FCARP24071 287 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 CCR2P41597 374 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 TAF6P49848 677 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 PLD1Q13393 1074 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 PKP1Q13835 747 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 PHLDB3Q6NSJ2 640 aa11.31□□□□□ -0.6
HMGXB3-205ENST00000514469 PDZD4Q76G19 769 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms