RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 UNC5BQ8IZJ1 945 aa5.35□□□□□ -1.55
CLDND1-228ENST00000513873 TTC9BQ8N6N2 239 aa5.35□□□□□ -1.55
CLDND1-228ENST00000513873 PI4KAP1Q8N8J0 262 aa5.35□□□□□ -1.55
CLDND1-228ENST00000513873 COG1Q8WTW3 980 aa5.35□□□□□ -1.55
CLDND1-228ENST00000513873 GPATCH3Q96I76 525 aa5.35□□□□□ -1.55
CLDND1-228ENST00000513873 CDK5RAP1Q96SZ6 601 aaKnown RBP5.35□□□□□ -1.55
CLDND1-228ENST00000513873 RBM15Q96T37 977 aaKnown RBP eCLIP5.35□□□□□ -1.55
CLDND1-228ENST00000513873 KCTD10Q9H3F6 313 aa5.35□□□□□ -1.55
CLDND1-228ENST00000513873 RNF181Q9P0P0 153 aa5.35□□□□□ -1.55
CLDND1-228ENST00000513873 EDARQ9UNE0 448 aa5.35□□□□□ -1.55
CLDND1-228ENST00000513873 MEGF6O75095 1541 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 A0A0G2JLW4 131 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 GPR42O15529 346 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 RAD17O75943 681 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 MYL6BP14649 208 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 ANAPC15P60006 121 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 MRPS9P82933 396 aaKnown RBP5.34□□□□□ -1.55
CLDND1-228ENST00000513873 ATP8B2P98198 1209 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 ITKQ08881 620 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 SLC39A6Q13433 755 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 RIN1Q13671 783 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 CEP85Q6P2H3 762 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 G2E3Q7L622 706 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 POLNQ7Z5Q5 900 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 PLBD2Q8NHP8 589 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 TGFBRAP1Q8WUH2 860 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 LMBR1Q8WVP7 490 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 AUTS2Q8WXX7 1259 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 FAM89AQ96GI7 184 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 TCF25Q9BQ70 676 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 PLA2G12BQ9BX93 195 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 QRSL1Q9H0R6 528 aaKnown RBP5.34□□□□□ -1.55
CLDND1-228ENST00000513873 EPC1Q9H2F5 836 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 DCTPP1Q9H773 170 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 PCDH12Q9NPG4 1184 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 DNAJC28Q9NX36 388 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 PLA2G3Q9NZ20 509 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 DPP7Q9UHL4 492 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 ST6GALNAC2Q9UJ37 374 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 MAP3K2Q9Y2U5 619 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 CDY2AQ9Y6F7 541 aa5.34□□□□□ -1.55
CLDND1-228ENST00000513873 DOT1LQ8TEK3 1739 aa5.34□□□□□ -1.56
CLDND1-228ENST00000513873 KDM6AO15550 1401 aaPredicted RBP5.33□□□□□ -1.56
CLDND1-228ENST00000513873 DICER1Q9UPY3 1922 aaKnown RBP5.33□□□□□ -1.56
CLDND1-228ENST00000513873 A0A0A6YYK5 440 aaPredicted RBP5.33□□□□□ -1.56
CLDND1-228ENST00000513873 GRM8O00222 908 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 KCNQ3O43525 872 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 PRAMEF4O60810 478 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 ALDH1A2O94788 518 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 CFBP00751 764 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 GAAP10253 952 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 CDK17Q00537 523 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 CD69Q07108 199 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 AIMP1Q12904 312 aaKnown RBP5.33□□□□□ -1.56
CLDND1-228ENST00000513873 OS9Q13438 667 aaPredicted RBP5.33□□□□□ -1.56
CLDND1-228ENST00000513873 CLUL1Q15846 466 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 BEND3Q5T5X7 828 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 GAREM2Q75VX8 874 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 COPS6Q7L5N1 327 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 SGMS1Q86VZ5 419 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 D2HGDHQ8N465 521 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 CNTD1Q8N815 330 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 CFHR4Q92496 578 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 KIF1BPQ96EK5 621 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 TMEM176AQ96HP8 235 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 MEIS3Q99687 375 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 SOX7Q9BT81 388 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 FAM126AQ9BYI3 521 aaPredicted RBP5.33□□□□□ -1.56
CLDND1-228ENST00000513873 LRRCC1Q9C099 1032 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 VTA1Q9NP79 307 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 IL23AQ9NPF7 189 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 TNNQ9UQP3 1299 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 LTN1O94822 1766 aa5.33□□□□□ -1.56
CLDND1-228ENST00000513873 MRC1P22897 1456 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 C4BP0C0L5 1744 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 TOGARAM1Q9Y4F4 1720 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 hCG_2014768A0A024R1R8 64 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 UBE2QL1A1L167 161 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 PATE3B3GLJ2 98 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 MATN2O00339 956 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 FOXS1O43638 330 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 SEC24DO94855 1032 aaPredicted RBP5.32□□□□□ -1.56
CLDND1-228ENST00000513873 LY86O95711 162 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 LTA4HP09960 611 aaKnown RBP5.32□□□□□ -1.56
CLDND1-228ENST00000513873 COMTP21964 271 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 KCNA3P22001 575 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 MSX2P35548 267 aaPredicted RBP5.32□□□□□ -1.56
CLDND1-228ENST00000513873 SLC5A3P53794 718 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 AMPD3Q01432 767 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 MEF2AQ02078 507 aaPredicted RBP5.32□□□□□ -1.56
CLDND1-228ENST00000513873 DUSP2Q05923 314 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 G3BP1Q13283 466 aaKnown RBP eCLIP5.32□□□□□ -1.56
CLDND1-228ENST00000513873 KLF1Q13351 362 aaPredicted RBP5.32□□□□□ -1.56
CLDND1-228ENST00000513873 TRIM25Q14258 630 aaKnown RBP5.32□□□□□ -1.56
CLDND1-228ENST00000513873 ICAM4Q14773 271 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 BMP2KLQ5H9B9 411 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 TOR2AQ5JU69 321 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 GJC2Q5T442 439 aaPredicted RBP5.32□□□□□ -1.56
CLDND1-228ENST00000513873 PGM2L1Q6PCE3 622 aa5.32□□□□□ -1.56
CLDND1-228ENST00000513873 USP51Q70EK9 711 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms