RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 LNX1Q8TBB1 728 aaPredicted RBP16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 MYLIPQ8WY64 445 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 TAF4BQ92750 862 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 ZNF560Q96MR9 790 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 CDCA3Q99618 268 aaPredicted RBP16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 TCF25Q9BQ70 676 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 OXCT2Q9BYC2 517 aaPredicted RBP16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 NSUN3Q9H649 340 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 TMEM8AQ9HCN3 771 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 AGAP1Q9UPQ3 857 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 BACE2Q9Y5Z0 518 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 PRRC2BQ5JSZ5 2229 aaKnown RBP16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 KPNA7A9QM74 516 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 NCK2O43639 380 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 VNN1O95497 513 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 CAVIN2O95810 425 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 CCDC192P0DO97 292 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 POLR2BP30876 1174 aaKnown RBP16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 BRCC3P46736 316 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 CREMQ03060 361 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 SV2CQ496J9 727 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 RTP2Q5QGT7 225 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 FAM171A1Q5VUB5 890 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 LMBRD2Q68DH5 695 aaPredicted RBP16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 C11orf57Q6ZUT1 292 aaPredicted RBP16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 APPL2Q8NEU8 664 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 FAM84AQ96KN4 292 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 SENP8Q96LD8 212 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 MRPL17Q9NRX2 175 aaKnown RBP16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 NUB1Q9Y5A7 615 aa16.73■□□□□ 0.27
POLR2J3-218ENST00000513506 REV3LO60673 3130 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 PLXNA4Q9HCM2 1894 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 P4HA2O15460 535 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 PAPLNO95428 1278 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 CXCL14O95715 111 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 MYO1EQ12965 1108 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 NCOA4Q13772 614 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 NCAPHQ15003 741 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 CTC1Q2NKJ3 1217 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 ZSCAN23Q3MJ62 389 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 CDKAL1Q5VV42 579 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 KRT39Q6A163 491 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 SMYD5Q6GMV2 418 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 TMEM184AQ6ZMB5 413 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 ANKS3Q6ZW76 656 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 MTRRQ9UBK8 725 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 DSEQ9UL01 958 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 COL4A4P53420 1690 aaPredicted RBP16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 MYO7AQ13402 2215 aa16.72■□□□□ 0.27
POLR2J3-218ENST00000513506 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 HIDE1A8MVS5 230 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 ASS1P00966 412 aaKnown RBP16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 URODP06132 367 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 TRIM49P0CI25 452 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 TRIM49CP0CI26 452 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 FOSL2P15408 326 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 MYL5Q02045 173 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 DUSP6Q16828 381 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 SGSM1Q2NKQ1 1148 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 SLC8B1Q6J4K2 584 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 TMEM86AQ8N2M4 240 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 TOP6BLQ8N6T0 577 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 HASPINQ8TF76 798 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 PPP2R3CQ969Q6 453 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 HPDLQ96IR7 371 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 NAT10Q9H0A0 1025 aaKnown RBP16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 FAM124BQ9H5Z6 455 aaPredicted RBP16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 ENTPD7Q9NQZ7 604 aa16.71■□□□□ 0.27
POLR2J3-218ENST00000513506 SYCE3A1L190 88 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 GABRDO14764 452 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 CNPP09543 421 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 ODC1P11926 461 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 ZNF18P17022 549 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 EEF1GP26641 437 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 TKTP29401 623 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 GCLMP48507 274 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 MXI1P50539 228 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 HYAL1Q12794 435 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 CCDC40Q4G0X9 1142 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 VARS2Q5ST30 1063 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 LILRA6Q6PI73 481 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 FAM114A1Q8IWE2 563 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 KLHL5Q96PQ7 755 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 CLSTN3Q9BQT9 956 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 DNAJC25Q9H1X3 360 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 HSD3B7Q9H2F3 369 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 MAFFQ9ULX9 164 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 NFE2L3Q9Y4A8 694 aa16.7■□□□□ 0.26
POLR2J3-218ENST00000513506 H7C4K7 107 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 I3L4J1 428 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 CYB561D2O14569 222 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 TEX28O15482 410 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 N4BP1O75113 896 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 TACC1O75410 805 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 HLA-DRAP01903 254 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 IGFBP4P22692 258 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 FMO5P49326 533 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 MYL6P60660 151 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 TRPC3Q13507 836 aa16.69■□□□□ 0.26
POLR2J3-218ENST00000513506 RAB33AQ14088 237 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms