RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 ARID3BQ8IVW6 561 aaPredicted RBP11.53□□□□□ -0.56
CLDND1-227ENST00000513452 BSNDQ8WZ55 320 aa11.53□□□□□ -0.56
CLDND1-227ENST00000513452 LRRC3BQ96PB8 259 aa11.53□□□□□ -0.56
CLDND1-227ENST00000513452 HHIPQ96QV1 700 aa11.53□□□□□ -0.56
CLDND1-227ENST00000513452 C2orf40Q9H1Z8 148 aa11.53□□□□□ -0.56
CLDND1-227ENST00000513452 POLR3BQ9NW08 1133 aaPredicted RBP11.53□□□□□ -0.56
CLDND1-227ENST00000513452 AFF4Q9UHB7 1163 aaKnown RBP11.53□□□□□ -0.56
CLDND1-227ENST00000513452 GCN1Q92616 2671 aaKnown RBP11.52□□□□□ -0.57
CLDND1-227ENST00000513452 SMIM28A0A1B0GU29 152 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 ACKR2O00590 384 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 CPLX1O14810 134 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 DCLK1O15075 740 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 BAG4O95429 457 aaKnown RBP11.52□□□□□ -0.57
CLDND1-227ENST00000513452 CEACAM1P13688 526 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 RPS6KB1P23443 525 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 RNF19BQ6ZMZ0 732 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 TMC8Q8IU68 726 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 SLFN12Q8IYM2 578 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 MCPH1Q8NEM0 835 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 TMEM209Q96SK2 561 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 NAP1L4Q99733 375 aaKnown RBP11.52□□□□□ -0.57
CLDND1-227ENST00000513452 HSD17B14Q9BPX1 270 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 AGXT2Q9BYV1 514 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 CCDC113Q9H0I3 377 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 DUSP15Q9H1R2 295 aaPredicted RBP11.52□□□□□ -0.57
CLDND1-227ENST00000513452 TMEM9BQ9NQ34 198 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 NUB1Q9Y5A7 615 aa11.52□□□□□ -0.57
CLDND1-227ENST00000513452 DSPP15924 2871 aaKnown RBP11.51□□□□□ -0.57
CLDND1-227ENST00000513452 BCLAF3A2AJT9 711 aaKnown RBP11.51□□□□□ -0.57
CLDND1-227ENST00000513452 TAF4O00268 1085 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 HYAL3O43820 417 aaPredicted RBP11.51□□□□□ -0.57
CLDND1-227ENST00000513452 ATG13O75143 517 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 RHOBTB1O94844 696 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 PRAMEF12O95522 483 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 CSRP1P21291 193 aaKnown RBP11.51□□□□□ -0.57
CLDND1-227ENST00000513452 MRPL58Q14197 206 aaKnown RBP11.51□□□□□ -0.57
CLDND1-227ENST00000513452 ITPRIPL2Q3MIP1 535 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 ATF7IP2Q5U623 682 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 FSTL4Q6MZW2 842 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 FBXL16Q8N461 479 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 DEPTORQ8TB45 409 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 PGLYRP2Q96PD5 576 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 MKNK1Q9BUB5 465 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 KIFC3Q9BVG8 833 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 LRRC3Q9BY71 257 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 MAFFQ9ULX9 164 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 WDFY3Q8IZQ1 3526 aa11.51□□□□□ -0.57
CLDND1-227ENST00000513452 ITPR1Q14643 2758 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 EML5Q05BV3 1969 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 RNF40O75150 1001 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 GBP1P32455 592 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 MCM4P33991 863 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 YARSP54577 528 aaKnown RBP11.5□□□□□ -0.57
CLDND1-227ENST00000513452 OSTNP61366 133 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 GRSF1Q12849 480 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLDND1-227ENST00000513452 PLD1Q13393 1074 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 KARSQ15046 597 aaKnown RBP11.5□□□□□ -0.57
CLDND1-227ENST00000513452 UAP1L1Q3KQV9 507 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 EARS2Q5JPH6 523 aaKnown RBP11.5□□□□□ -0.57
CLDND1-227ENST00000513452 GPR158Q5T848 1215 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 FAM177A1Q8N128 213 aaPredicted RBP11.5□□□□□ -0.57
CLDND1-227ENST00000513452 CAMKK1Q8N5S9 505 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 CEP120Q8N960 986 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 DEFB124Q8NES8 71 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 KIF12Q96FN5 646 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 SUSD3Q96L08 255 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 CCDC94Q9BW85 323 aaPredicted RBP11.5□□□□□ -0.57
CLDND1-227ENST00000513452 DNAJC25Q9H1X3 360 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 ATXN3LQ9H3M9 355 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 TOPORSQ9NS56 1045 aaPredicted RBP11.5□□□□□ -0.57
CLDND1-227ENST00000513452 SLC38A7Q9NVC3 462 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 KLK13Q9UKR3 277 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 PCDHA12Q9UN75 941 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 SNX14Q9Y5W7 946 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 LAMA1P25391 3075 aa11.5□□□□□ -0.57
CLDND1-227ENST00000513452 KHNYNO15037 678 aaKnown RBP11.49□□□□□ -0.57
CLDND1-227ENST00000513452 VNN2O95498 520 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 OR4Q2P0C623 313 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 NAMPTP43490 491 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 MCM2P49736 904 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 EPHB3P54753 998 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 EVCP57679 992 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 CALCRLQ16602 461 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 ARHGAP15Q53QZ3 475 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 TMEM196Q5HYL7 178 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 NT5DC1Q5TFE4 455 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 GAREM2Q75VX8 874 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 APBB1IPQ7Z5R6 666 aaPredicted RBP11.49□□□□□ -0.57
CLDND1-227ENST00000513452 APPL2Q8NEU8 664 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 BPIFB1Q8TDL5 484 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 DDX12PQ92771 950 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 C18orf25Q96B23 403 aaPredicted RBP11.49□□□□□ -0.57
CLDND1-227ENST00000513452 ZMAT2Q96NC0 199 aaKnown RBP11.49□□□□□ -0.57
CLDND1-227ENST00000513452 CRISPLD1Q9H336 500 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 TTC12Q9H892 705 aaPredicted RBP11.49□□□□□ -0.57
CLDND1-227ENST00000513452 GJB4Q9NTQ9 266 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms